J-GLOBAL ID:201410046856093266   Research Resource code:NBDC01219 Update date:Jun. 17, 2013

TMPad: TransMembrane Protein Helix-Packing Database

TMPad: TransMembrane Protein Helix-Packing Database
Owning Organization:
  • Bioinformatics Lab., Institute of Information Science, Academia Sinica
Resource classification: Database
Tag (subject)  (1): Protein
Tag (data type)  (5): Sequence ,  Interaction/Pathway ,  Image/Movie ,  3D structure ,  Chemical structure
The TMPad database contains information on the structural folds in alpha-helical membrane proteins obtained from observing helix-helix interactions experimentally. Additionally, information is provided on the geometric descriptors of these interactions, the accessibility of lipids, topology, ligand and on the observed binding sites. The structures of TM helix-packing and their functions are also organized according to a classification system. This database contains 1107 transmembrane alpha-helical protein entries, 4061 protein chains, 17413 helix-helix interactions and 954 Pubmed links. Search options provided are by PDB identifier, by keyword or by multiple identifiers (advanced).
Source: NBDC
Record maintainer: Integbio Database Catalog
Record license: Creative Commons CC0 license

Return to Previous Page