J-GLOBAL ID:201410047450928436   Research Resource code:NBDC00937 Update date:Jul. 23, 2018

GtRNAdb: Genomic tRNA Database

GtRNAdb: Genomic tRNA Database
Owning Organization:
  • University of California
Resource classification: Database
Tag (subject)  (1): RNA
Tag (data type)  (1): Sequence
Species (3): Eukaryota (NCBI Taxonomy ID: 2759) ,  Archaea (NCBI Taxonomy ID: 2157) ,  Bacteria (NCBI Taxonomy ID: 2)
GtRNAdb is a database of tRNA gene predictions made by an original program (tRNAscan-SE) on complete or nearly complete genomes. It contains automated annotation for genomes of Eukarya, Archaea and Bacteria. With automated sequence analysis, exceptions to general identification rules, isoacceptor type predictions (esp. due to variable post-transcriptional anticodon modification), and questionable tRNA identifications (due to pseudogenes, SINES, or other tRNA-derived elements) are found.
Source: NBDC
Record maintainer: Integbio Database Catalog
Record license: Creative Commons CC0 license

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