Rsrc
J-GLOBAL ID：201410058281793447
Research Resource code：NBDC01218
Update date：Sep. 21, 2022
PmiRKB: Plant microRNA Knowledge Base
PmiRKB: Plant microRNA Knowledge Base
Owning Organization：
Resource classification：
Data,Database
Tag (subject) (2)：
Genetic variation
, RNA
Tag (data type) (1)：
Sequence
Species (2)：
Arabidopsis thaliana (NCBI Taxonomy ID: 3702)
, Oryza sativa (NCBI Taxonomy ID: 4530)
Overview：
PmiRKB (Plant microRNA Knowledge Base) is a database collecting information on miRNAs from Arabidopsis thaliana and Oryza sativa.The functional modules that are provided are MiR-Tar, SNPs, Self-reg and Pri-miRNAs. The MiR module contains miRNA sequences and information on pre-miRNA clusters. Target regions of SNPs-from 7 Arabidopsis and of 21 Oryza subspecies-found in miRNAs and pre-miRNAs are provided. Scenes of transcription surrounding the pre-miRNAs are made available with the Pri-miR module, and cleavage signals in target recognition sites of miRNA are revealed by the MiR-Tar module. The Self-reg module makes it possible to infer signals of remnants produced in the process of miRNA-mediated self-regulation and miRNA precursor processing. A keyword search option is provided.
Source：
NBDC
Record maintainer：
Integbio Database Catalog
Record license：
Creative Commons CC0 license
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