J-GLOBAL ID:201410061208429045   Research Resource code:NBDC00489 Update date:Jun. 17, 2013

H-DBAS: Human-transcriptome DataBase for Alternative Splicing

H-DBAS: Human-transcriptome DataBase for Alternative Splicing
Resource classification: Data,Database
Tag (subject)  (2): cDNA/EST ,  RNA
Tag (data type)  (1): Sequence
Species (6): Homo sapiens (NCBI Taxonomy ID: 9606) ,  Mus musculus (NCBI Taxonomy ID: 10090) ,  Rattus norvegicus (NCBI Taxonomy ID: 10116) ,  Pan troglodytes (NCBI Taxonomy ID: 9598) ,  Macaca mulatta (NCBI Taxonomy ID: 9544) ,  Canis lupus familiaris (NCBI Taxonomy ID: 9615)
H-DBAS is the Human-transcriptome DataBase for Alternative Splicing, and is based on H-InvDB. Features of H-DBAS include annotated information of genome-wide human AS variants. Representative AS variants (RASVs) were identified from data of 6 model mammals, namely, human, mouse, rat, chimpanzee, macaque and dog, and are provided as full-length cDNA data sets, mRNA data sets and RNA data sets. Equally-spliced variants between these mammals were identified and compared sets are available. Splice sites and motifs that affect SNPs in humans, RASVs that affect protein function in humans and AS junctions tedetced by RNA-Sez tags are provided.
Source: NBDC
Record maintainer: Integbio Database Catalog
Record license: Creative Commons CC0 license

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