Genome Network Platform

• National Institute of Genetics

Genome network platform is an integrated database and web viewers for the Genome Network Project. It integrates experimental data, which generated from the project in association with the public databases, relating to the following information: 1) transcription starting position of human genes in the human genome, 2) conjunction to control region on transcriptional factors and the human genome, 3) protein-protein interaction with a central focus on transcription factors. This database provides the following functions: a) 'Genome Explorer' for annotation of landmarks (genes, transcription start sites, etc.) aligned in accordance with their genome locations. b) 'PPI Network' for a graphical view of protein-protein interaction (PPI) network from the experimental data generated under the project and the public datasets. c) 'Expression Profile' to cluster genes by expression pattern and display the result with heatmap, and for genes which have relation of coregulation and anti-coregulation. d) 'Comparison Viewer' for comparison the genomic region of Human/Mouse. Users are able to obtain the distributed clones.