Rsrc
J-GLOBAL ID:201410081752662501   Research Resource code:NBDC00783 Update date:Jun. 17, 2013

MassBase: A comprehensive mass spectral tags archive for plant metabolomics

MassBase: A comprehensive mass spectral tags archive for plant metabolomics
Owning Organization:
Resource classification: Database
Tag (subject)  (1): Metabolite
Tag (data type)  (1): Method
Species (17): Acacia mangium (NCBI Taxonomy ID: 224085) ,  Arabidopsis thaliana (NCBI Taxonomy ID: 3702) ,  Cosmos bipinnatus (NCBI Taxonomy ID: 51277) ,  Dicksonia antarctica (NCBI Taxonomy ID: 3271) ,  Escherichia coli (NCBI Taxonomy ID: 562) ,  Glycine max (NCBI Taxonomy ID: 3847) ,  Hevea brasiliensis (NCBI Taxonomy ID: 3981) ,  Jatropha curcas (NCBI Taxonomy ID: 180498) ,  Lotus japonicus (NCBI Taxonomy ID: 34305) ,  Medicago sativa (NCBI Taxonomy ID: 3879) ,  Medicago truncatula (NCBI Taxonomy ID: 3880) ,  Mus musculus (NCBI Taxonomy ID: 10090) ,  Nicotiana tabacum (NCBI Taxonomy ID: 4097) ,  Saccharomyces cerevisiae (NCBI Taxonomy ID: 4932) ,  Solanum lycopersicum (NCBI Taxonomy ID: 4081) ,  Solanum pimpinellifolium (NCBI Taxonomy ID: 4084) ,  Thellungiella halophila (NCBI Taxonomy ID: 98038)
Overview:
MassBase is a fundamental archive of mass spectral tags (MST) for metabolomics. It includes both known and unknown assigned (or predicted) peaks that are found in biological samples (mainly plants) and standard chemical reagents for peak annotation. It provides raw mass chromatograms from various biological samples as well as text-file data of these raw chromatograms. It is expected to contribute to an understanding of the metabolism of organisms together with MassBank and KNApSAcK databases, and that it will help with the development of pipeline software to extract metabolite peaks from annotated metabolites in the process of linking DNA information to metabolism.
Source: NBDC
Record maintainer: Integbio Database Catalog
Record license: Creative Commons CC0 license

Return to Previous Page