Rsrc
J-GLOBAL ID:201410086232071278   Research Resource code:NBDC00103 Update date:Jun. 17, 2013

HPRD: Human Protein Reference Database

HPRD: Human Protein Reference Database
Owning Organization:
  • Institute of Bioinformatics
Resource classification: Database
Tag (subject)  (3): cDNA/EST ,  Protein ,  Health/Disease
Tag (data type)  (1): Sequence
Species (1): Homo sapiens (NCBI Taxonomy ID: 9606)
Overview:
HPRD (Human Protein Reference Database) version 9 is a manually curated, fully GO compliant protein database.

The repository contains 30,047 protein entries, 41,327 protein-protein interactions and 93,710 posttranslational modifications. There are 112,158 occurrences of protein expression, 22,490 of subcellular positioning and 470 domains are identified.

All the information in HPRD, including features of proteins such as post-translational modifications, tissue expression, subcellular localization and protein-protein interactions, may be downloaded as XML and FLAT files. Permission is, however, necessary before this may be done.

The database can be browsed by selecting a protein, domain, motif, PTM or localization class of interest from a list that is provided.

A Blast search option is available by entering a nucleotide or protein sequence.
Source: NBDC
Record maintainer: Integbio Database Catalog
Record license: Creative Commons CC0 license

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