TAKAHASHI Yurika

タカハシユリカ | TAKAHASHI Yurika

Affiliation and department：
Job title： Assistant professor

Research field (2)： Genomics , Applied microbiology

Research keywords (17)： extracellular DNA , NGS , metagenome , Toyama Bay , evolution , mobile genetic element , Linux , tilling array , R , transcriptome , genome , bioinfomatics , bacteria , horizontal gene transfer , bioinformatics , environmental microbiology , plasmid

Research theme for competitive and other funds (9)：

2016 - 2017 Characterization of methene hydrates impacts on the microbial and genetic diversity in Toyama Bay.
2016 - 2017 生物情報学を基盤とした複合生物系解析による環境保全技術・有用物質生産法の効率化(継続)
2015 - 2016 Characterization of methene hydrates impacts on the microbial and genetic diversity in Toyama Bay.
2015 - 2016 生物情報学を基盤とした複合生物系解析による環境保全技術・有用物質生産法の効率化
2014 - 2016 Potential contribution of extracellular plasmids to horizontal gene transfer

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Papers (14)：

Toshiro Hata, Yurika Takahashi, Hiromi Nishida, Hisato Yasuda. Experimental study on enhancement of soil strength based on microbial functions isolated from methane hydrate-bearing layer in Japan Sea. Japanese Geotechnical Journal. 2017. 12. 1. 151-160
Sawako Takahashi, Ayana Takayanagi, Yurika Takahashi, Taku Oshima, Hiromi Nishida. Comparison of transcriptomes of enlarged spheroplasts of Erythrobacter litoralis and Lelliottia amnigena. AIMS Microbiology. 2016. 2. 2. 152-189
Seunguk Lee, Yurika Takahashi, Hiromu Oura, Chiho Suzuki-Minakuchi, Kazunori Okada, Hisakazu Yamane, Nobuhiko Nomura, Hideaki Nojiri. Effects of carbazole-degradative plasmid pCAR1 on biofilm morphology in Pseudomonas putidaKT2440. ENVIRONMENTAL MICROBIOLOGY REPORTS. 2016. 8. 2. 261-271
Choong-Soo Yun, Yurika Takahashi, Masaki Shintani, Toshiharu Takeda, Chiho Suzuki-Minakuchi, Kazunori Okada, Hisakazu Yamane, Hideaki Nojiri. MvaT Family Proteins Encoded on IncP-7 Plasmid pCAR1 and the Host Chromosome Regulate the Host Transcriptome Cooperatively but Differently. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. 2016. 82. 3. 832-842
Yurika Takahashi. Application of polydimethylsiloxane-based optical system for measuring optical density of microbial culture. BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY. 2016. 80. 12. 2486-2489

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MISC (6)：

Momoka TERASAKI, Yurika TAKAHASHI, Hiromi NISHIDA. Bacterial DNAs included in Japanese rise wine, sake. 2017. 27. 44-47
Suguru NOTO, Noriyuki TAKASE, Yurika TAKAHASHI, Takashi MATSUMOTO, Hirofumi YOSHIKAWA, KeikoTSUCHIKANE, Akira HOSOYAMA, Nobuyuki FUJITA, Kazunori OKADA, Hisakazu YAMANE, et al. Host Chromosomal Factor Reducing Plasmid Fitness Cost (Japanease). Journal of Environmental Biotechnology. 2012. 12. 2. 135-139
Masaki Shintani, Yurika Takahashi, Hisakazu Yamane, Hideaki Nojiri. The Behavior and Significance of Degradative Plasmids Belonging to Inc Groups in Pseudomonas within Natural Environments and Microcosms. MICROBES AND ENVIRONMENTS. 2010. 25. 4. 253-265
Hideaki Nojiri, Yurika Takahashi, Masaki Shintani. Significance of horizontal gene transfer via plasmid conjugation to use bacteria in the natural environment (Japanease). Bioscience and Industry. 2009. 67. 2. 59-64
Yurika Takahashi, Masaki Shintani, Hisakazu Yamane, Hideaki Nojiri. Gene organization of degradative plasmid changed to adapt metabolic capacities of host (Japanease). Journal of Environmental Biotechnology. 2008. 8. 2. 89-94

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Books (1)：

Biodegradative Bacteria
Springer Japan 2014

Education (3)：

2007 - 2012 The University of Tokyo Graduate School of Agricultural and Life Sciences Biotechnology
2005 - 2007 The University of Tokyo Faculty of Agriculture Department of Applied Life Science Course
2003 - 2005 The University of Tokyo College of Arts and Sciences Science Section (Course 2)

Professional career (1)：

Ph. D (The University of Tokyo)

Work history (3)：

2014/04 - 現在 Toyama Prefectural University Department of Biotechnology Assistant professor
2012/04 - 2014/03 University of Tokyo Biotechnology Research Center Postdoctoral researcher
2009/04 - 2012/03 The Japan Society for the Promotion of Science Research Fellow (DC1)

Awards (6)：

2012/09 - International Society for Plasmid Biology and other Mobile Genetic Elements The Brian Wilkins Memorial Fund Prize
2012/06 - 環境バイオテクノロジー学会 2012年度大会ポスター賞
2012/03 - 第6回日本ゲノム微生物学会年会優秀発表賞
2011/10 - Japan Society for Bioscience, Biotechnology, and Agrochemistry Poster Award on Kanto Branch Conference 2011
2008/08 - International Plasmid Biology Conference 2008 Best Poster Award (graduate student category)

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Association Membership(s) (5)：

JAPANESE SOCIETY FOR EXTREMOPHILES , Japan Society for Environmental Biotechnology, Japan , Society of Genome Microbiology , THE SOCIETY FOR BIOTECHNOLOGY, JAPAN , JAPAN SOCIETY FOR BIOSCIENCE, BIOTECHNOLOGY, AND AGROCHEMISTRY

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