2014 - 2016 Development of the program module for the docking between gamma-secretase and APP
2012 - 2013 Interaction between membrane protein and lipids in the raft
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Papers (55)：
Makoto Fukuda, Kazunori Sadano, Tomoki Maeda, Eri Murata, Naoyuki Miyashita, Tsutomu Tanaka, Tomohiro Mori, Akane Saito, Kiyotaka Sakai. Characterization of anisotropic pore structure and dense selective layer of capillary membranes for long-term ECMO by cross-sectional ion-milling method. Journal of Artificial Organs. 2024
M. Ottawa, N. Miyashita. Interaction between PET tracer and the specific residues around the gate of the open form of Monoamine Oxidase B (MAO-B). Journal of Physics: Conference Series. 2022. 2207. 012025
L. Matsukura, N. Miyashita. Simulation study of the function of domain swapping in the HSP90 chaperone cycle. Journal of Physics: Conference Series. 2022. 2207. 012024
Lisa MATSUKURA, Naoyuki MIYASHITA. Simulation Study of the Stability of Heat Shock Protein 90 (HSP90) and Co-chaperone p23 Complex. Journal of Computer Chemistry, Japan. 2021. 20. 3. 94-96
Naoyuki Miyashita, Yasushige Yonezawa. Mutual information analysis of the dynamic correlation between side chains in proteins. The Journal of Chemical Physics. 2021. 155. 4. 044107-044107
Naoyuki Miyashita, Nobutaka Onishi, Masaya Furue, Takuma Shiraki, Yasushige Yonezawa. Dynamics of the gate of DFHBI and ions in riboswitch SPINACH. ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY. 2018. 256
Naoyuki Miyashita, Fumiko Ogushi, Yuji Sugita. Raft environments assist the aggregation of the transmembrane region of Amyloid Precursor Protein. ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY. 2015. 249
A New Morphing Method Using Molecular Dynamics Simulations and Deep Neural Network to Elucidate Large Conformational Changes in Biomolecules
(International workshop on many body interactions 2024 2024)
1999 - 2003 The Graduage University for Advanced Study
1997 - 1999 University of Electro-Communications Department of Electro-Communications Advanced physics and chemistry
1992 - 1997 University of Electro-Communications Department of Electro-Communications Applied physics and chemistry
Professional career (1)：
博士(理学) (総合研究大学院大学)
Work history (16)：
2018/04 - 現在 University of Electro-Communicatins Visiting Associate Professor
2017/04 - 現在 KINDAI University Biology Oriented Science & Technology Associate Professor
2016/04 - 現在 Kindai University
2018/04 - 2024/03 RIKEN Center for Biosystems Dynamics Research Visiting Scientist
2015/08 - 2024/03 RIKEN AICS Visiting Scientists
2015/04 - 2018/03 RIKEN QBiC Visiting Scientist
2015/04 - 2017/03 KINDAI University Biology Oriented Science & Technology Associate Professor
2011/04 - 2015/03 RIKEN AICS Research Scientist
2011/04 - 2015/03 RIKEN QBiC Research Scientist
2013/07 - 2013/07 Kobe University 理学研究科 非常勤講師
2011/04 - 2013/03 RIKEN ISLiM Research Scientist
2007/12 - 2011/03 RIKEN ISLiM Research Scientist
2007/04 - 2007/11 GIFU University CEID Assistant Professor
2005/04 - 2007/03 BOSTON University Chemistry Department Research Associate
2003/04 - 2005/03 The University of Tokyo IMCB Post Doctoral fellow
2001/06 - 2003/02 岡崎国立共同研究機構 RA
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Committee career (1)：
2003/09 - 2005/08 日本物理学会 第54,55期 代議員
Association Membership(s) (8)：
日本ゲノム編集学会
, THE PHYSICAL SOCIETY OF JAPAN
, THE MOLECULAR BIOLOGY SOCIETY OF JAPAN
, THE BIOPHYSICAL SOCIETY
, The Chemical Society of America
, THE BIOPHYSICAL SOCIETY OF JAPAN
, 理論化学会
, 日本蛋白質質科学会
