Rchr
J-GLOBAL ID:201501077719678317
Update date: Apr. 10, 2024
OCHIAI HIROSHI
オチアイ ヒロシ | OCHIAI HIROSHI
Affiliation and department:
Job title:
Professor
Homepage URL (2):
https://www.bioreg.kyushu-u.ac.jp/labo/ged/
,
https://www.bioreg.kyushu-u.ac.jp/labo/ged/en/
Research field (4):
Genomics
, Environmental effects of chemicals
, Environmental effects of radiation
, Systems genomics
Research keywords (14):
SNP
, 遺伝子ターゲティング
, 一塩基置換
, 遺伝病
, 遺伝子挿入
, TALEN
, zinc-finger nuclease
, ゲノム編集
, Gene expression noise
, Live imaging
, CRISPR
, ES cell
, pluripotent stem cells
, single cell analysis
Research theme for competitive and other funds (23):
- 2024 - 2029 哺乳類初期発生における細胞可塑性を制御するエピコードの解読
- 2023 - 2029 Understanding the mammalian cell fate regulation framework through multimodal spatiotemporal integrated omics analysis
- 2022 - 2025 Elucidation of the linkage between higher-order genome structural dynamics and gene expression
- 2023 - 2025 転写動態制御を担うゲノムモダリティ要因の理解
- 2022 - 2024 Elucidation of the linkage between non-genomic information replication and transcriptional dynamics between sister chromatids
- 2023 - 2024 高次定量イメージングによる転写動態制御機構の解明
- 2021 - 2023 Elucidation of factors regulating genomic modality in the determination of inactivating X chromosomes
- 2018 - 2023 核内RNAボディによるクロマチン制御機構の解明
- 2023 - 転写活性状態を制御する高次ゲノム構造形成因子の同定
- 2019 - 2022 高次ゲノム構造が織りなす複雑な遺伝子発現制御動態の解明
- 2020 - 2022 細胞ポテンシャル測定システムの開発
- 2019 - 2021 増幅遺伝子のコピー数の制御機構の解明
- 2015 - 2019 細胞多様性決定要因の網羅解析技術の開発
- 2016 - 2018 遺伝子発現制御と高次ゲノム構造動態の関係解明
- 2015 - 2018 遺伝子核内配置-転写同時ライブイメージングを利用した多能性幹細胞不均一性の解明
- 2014 - 2017 ゲノム編集法を用いた放射線感受性の個人差を規定する遺伝的素因の同定
- 2015 - 2016 細胞核内ライブイメージングを利用した多能性幹細胞不均一性の解明
- 2013 - 2015 新規な一塩基置換導入法の確立と疾患関連SNPの機能解析への応用
- 2015 - 2015 Stochastic promoter activation affects Nanog expression variability in mouse embryonic stem cells
- 2013 - 2013 高効率一塩基置換法の確立
- 2013 - 2013 革新的一塩基置換導入法の確立とヒト遺伝病解析への応用
- 2011 - 2013 発光イメージングを利用したDNA修復経路の破綻による神経症状発症機構の解明
- 2009 - 2010 多細胞生物における細胞間の遺伝子発現のゆらぎとその制御に関する研究
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Papers (32):
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Hiroaki Ohishi, Soya Shinkai, Hitoshi Owada, Takeru Fujii, Kazufumi Hosoda, Shuichi Onami, Takashi Yamamoto, Yasuyuki Ohkawa, Hiroshi Ochiai. Transcription-coupled changes in higher-order genomic structure and transcription hub viscosity prolong enhancer-promoter connectivity. bioRxiv. 2023
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Kosuke Tomimatsu, Takeru Fujii, Ryoma Bise, Kazufumi Hosoda, Yosuke Taniguchi, Hiroshi Ochiai, Hiroaki Ohishi, Kanta Ando, Ryoma Minami, Tachibana Taro, et al. Precise immunofluorescence canceling for highly multiplexed imaging capturing specific cell state. bioRxiv. 2023
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Hiroaki Ohishi, Seiru Shimada, Satoshi Uchino, Jieru Li, Yuko Sato, Manabu Shintani, owada hitoshi, Yasuyuki Ohkawa, Alexandros Pertsinidis, Takashi Yamamoto, et al. STREAMING-tag system reveals spatiotemporal relationships between transcriptional regulatory factors and transcriptional activity. Nature Communications. 2022. 13. 1. 7672
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Haruka Matsumori, Kenji Watanabe, Hiroaki Tachiwana, Tomoko Fujita, Yuma Ito, Makio Tokunaga, Kumiko Sakata-Sogawa, Hiroko Osakada, Tokuko Haraguchi, Akinori Awazu, Hiroshi Ochiai, Yuka Sakata, Koji Ochiai, Tsutomu Toki, Etsuro Ito, Ilya G Goldberg, Kazuaki Tokunaga, Mitsuyoshi Nakao, Noriko Saitoh. Ribosomal protein L5 facilitates rDNA-bundled condensate and nucleolar assembly. Life Science Alliance. 2022. 5. 7. e202101045
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Silvia Natsuko Akutsu, Tatsuo Miyamoto, Daiju Oba, Keita Tomioka, Hiroshi Ochiai, Hirofumi Ohashi, Shinya Matsuura. iPSC reprogramming-mediated aneuploidy correction in autosomal trisomy syndromes. PLoS One. 2022. 17. 3. e0264965
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MISC (28):
-
落合 博, 大川 恭行. 創薬研究を加速する空間オミクス技術. 実験医学増刊 あなたのラボから薬を生み出す アカデミア創薬の実践 All JAPAN体制の先端技術支援を利用した創薬の最前線. 2024. 42. 2
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Hiroshi Ochiai, Hiroaki Ohishi, Yuko Sato, Hiroshi Kimura. Organization of transcription and 3D genome as revealed by live-cell imaging. Current Opinion in Structural Biology. 2023. 81. 102615-102615
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Hiroshi Ochiai. Facilitating genome function understanding using genome editing dependent bioimaging techniques. Gene and Genome Editing. 2023. 5. 100022
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大石裕晃, 落合 博. 特定RNA分子/DNA領域のライブイメージング技術. 生体の科学. 2023. 74. 3. 260-265
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Hiroshi Ochiai. Fluctuation and Biological Function. The Cell. 2023. 55. 3
more...
Patents (3):
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複数蛍光色素定量方法および装置
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細胞の作製方法および該作製方法で作製された細胞
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DNA結合ドメインを含むポリペプチド
Books (7):
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実験医学別冊 最強のステップUPシリーズ エピゲノムをもっと見るためのクロマチン解析実践プロトコール (大川恭行,宮成悠介/編)
羊土社 2020 ISBN:9784758122481
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実験医学別冊 完全版 ゲノム編集実験スタンダード CRISPR-Cas9の設計・作製と各生物種でのプロトコールを徹底解説 (山本 卓,佐久間哲史/編)
羊土社 2019
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医療応用をめざすゲノム編集 最新動向から技術・倫理的課題まで 真下 知士/金田 安史編
KAGAKUDOJIN 2018
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Genome Editing in Animals
Springer New York 2017 ISBN:9781493971282
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All Aboutゲノム編集 “革命的技術”はいかにして私たちの研究・医療・産業を変えるのか? 真下知士,山本 卓/編
羊土社 2016 ISBN:9784758103596
more...
Lectures and oral presentations (62):
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空間オミクス技術で切り開く生命現象の高深度理解
(2024医療・健康ユニットシンポジウム 2024)
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遺伝子発現における転写バースト 〜細胞レベルでの影響と制御機構〜
(第1回WS「未踏探索における個性と集団の役割」 2024)
-
Unveiling transcriptional dynamics in pluripotent stem cells through imaging analysis
(RIKEN IMS Seminar 2024)
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Regulation of gene expression dynamics in pluripotent stem cells revealed by imaging analysis
(RIKEN BDR Seminar 2024)
-
Changes in higher-order genomeic structures during transcriptional dynamics revealed by multimodal chromatin tracing
(The 46th Annual Meeting of the Molecular Biology Society of Japan 2023)
more...
Education (3):
- 2008 - 2011 Hiroshima University Graduate School, Division of Natural Science Department of Mathematical and Life Sciences
- 2007 - 2008 Hiroshima University Graduate School, Division of Natural Science Department of Mathematical and Life Sciences
- 2003 - 2007 Hiroshima University Faculty of Science Departmet of Biological Science
Professional career (1):
- PhD (Science) (Hiroshima University)
Work history (8):
- 2023/03 - 現在 Kyushu University Division of Gene Expression Dynamics, Medical Research Center Initiative for High Depth Omics, Medical Institute of Bioregulation Professor
- 2021/04 - 2023/02 Hiroshima University Graduate School of Integrated Sciences for Life Associate Professor
- 2019/04 - 2021/03 Hiroshima University Graduate School of Integrated Sciences for Life Lecturer
- 2015/10/01 - 2019/03/31 Japan Science and Technology Agency Graduate School of Science, Department of Mathematical and Life Sciences, Hiroshima University PRESTO researcher
- 2013/04/01 - 2015/09/30 Hiroshima University Graduate School of Science Lecturer (Special Appointment)
- 2012/06/01 - 2013/03/31 Hiroshima University Research Institute for Radiation Biology and Medicine Assistant professor
- 2011/04/01 - 2012/05/31 Japan Society for the Promotion of Science Hiroshima University Research Fellow PD
- 2009/04/01 - 2011/03/31 Japan Society for the Promotion of Science Hiroshima University Research Fellow DC2
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Committee career (8):
- 2022/01 - 2024/12 Associate Editor of Journal of Biochemistry
- 2021/08 - 2023/07 Ministry of Education, Culture, Sports, Science and Technology - Japan Senior Scientific Research Specialist, Grants-in-Aid for Scientific Research (KAKENHI)
- 2022/10 - 2023/06 8th Annual Meeting of the Japanese Society for Genome Editing Conference Preparation Committee
- 2022/03 - 2022/04 日本ゲノム編集学会 日本ゲノム編集学会 選挙管理委員長
- 2015/07 - 2021/05 Editorial Board Member
- 2017/09 - 2018/06 日本ゲノム編集学会 日本ゲノム編集学会 第3回大会準備委員
- 2016/06 - 2016/09 日本ゲノム編集学会 日本ゲノム編集学会 第1回大会準備委員
- 2015/09 - 2015/09 International Summer School on Chromatin Dynamics 2015 実行委員・講師
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Awards (6):
Association Membership(s) (4):
THE BIOPHYSICAL SOCIETY OF JAPAN
, The Japanese society for Genome Editing
, The Japanese Society for Epigenetics
, THE MOLECULAR BIOLOGY SOCIETY OF JAPAN
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