Rchr
J-GLOBAL ID:201501081279250007
Update date: Apr. 08, 2024
Hirakawa Hideki
ヒラカワ ヒデキ | Hirakawa Hideki
Affiliation and department:
Homepage URL (1):
https://kaken.nii.ac.jp/d/r/80372746.ja.html
Research field (1):
Genomics
Research keywords (18):
バイオインフォマティクス
, タンパク質立体構造
, バイオインフォマテクス
, 比較ゲノム
, 遺伝子機能
, 酵素化学
, 機能部位
, 配列解析
, ゲノム比較
, SNP
, グラム陽性細菌
, メタゲノム解析
, 加水分解酵素
, 発現制御
, ゲノム
, 進化
, 遺伝子
, 発現解析
Research theme for competitive and other funds (33):
- 2022 - 2028 Platform for Advanced Genome Science
- 2023 - 2026 変異系統を用いたカラマツ雌花着花の原因遺伝子の特定とその発現制御機構の解明
- 2022 - 2026 Development of functional SNPs of crops and its application for identification of useful genes
- 2018 - 2021 Extensive characterization of domestication-related genes in buckwheat by utilizing the genetic resource of Yunnan province, China
- 2018 - 2021 Molecular mechanism for breaking down self-incompatibility in buckwheat
- 2018 - 2021 Molecular mechanisms of night-length recognition in photoperiodic flowering of chrysanthemum
- 2018 - 2021 Studies on the masculinization mechanism of spinach.
- 2018 - 2021 How hydrangea create two types of flowers?
- 2017 - 2021 Genetic diversity of root-knot nematode effector proteins
- 2016 - 2021 先進ゲノム解析研究推進プラットフォーム
- 2017 - 2020 Mechanism of seed enlargement during the Jomon period
- 2017 - 2020 Development of core collocation in garlic genetic resources through integrated omics analysis and its evaluation for functionality
- 2017 - 2020 Epigenetics analysis for determination of floral patterns in each cell
- 2017 - 2020 New insight into plant acid tolerance: physiological and molecular mechanisms of acid tolerance through mycorrhizal formation
- 2017 - 2020 Analysis of male sterility associated gene networks between mitochondrial and nuclear genomes in the cultivated strawberry
- 2017 - 2020 Study of the low-temperature dependent flowering in wild Dianthus species
- 2016 - 2019 Seasonal Variability in Dormancy and Flowering Competence in Chrysanthemum
- 2015 - 2019 Integrated genomics on important medicinal plants in Leguminosae
- 2015 - 2018 Linkage map construction based on LD and its application to polyploid species
- 2015 - 2018 Tracing the evolutionary process of plant-microbe interaction
- 2014 - 2018 Characterization of molecular evolution of plant isoquinoline alkaloid biosynthesis and its application to metabolic engineering
- 2014 - 2017 Application of integrated omics analyses by using Allium bio-resources to onion breeding
- 2014 - 2017 Development of a novel bioinformatics method to analyze big genome sequence data for efficient knowledge discovery
- 2014 - 2017 Functional analysis of physiological function-unknown or novel quinoprotein to seek an enzyme generating reduced PQQ
- 2014 - 2017 Comparative genomics and phenome analysis of closely related Acetic acid bacteria
- 2013 - 2016 Genomic information of an endophyte of Lotus japonicus to facilitate investigation on the symbiosis
- 2012 - 2016 Infererence of the SNP effects on gene functions
- 2010 - 2016 Platform of large scale and high quality genomics and bioinformatics: Towards the advancement of genome sciences in academia
- 2009 - 2011 Regulation of CARMA1 signaling and its role in immune homeostasis
- 2008 - 2010 Secretion mechanism of pathogenic proteases and adhesions in the periodontal pathogen Porphyromonas gingivalis.
- 2007 - 2009 Metagenome analysis for the classification of enzymes related to hydrolysis of bacterial cell wall by sequential and enzymatic analysis
- 2005 - 2009 Computational Biology for complicated genome system
- 2004 - 2006 グラム陽性細菌におけるオルソログ遺伝子の分布の比較に関する研究
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Papers (214):
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Ken-ichi Kurotani, Hideki Hirakawa, Kenta Shirasawa, Koya Tagiri, Moe Mori, Yasunori Ichihashi, Takamasa Suzuki, Yasuhiro Tanizawa, Yasukazu Nakamura, Sachiko Isobe, et al. Establishing a comprehensive web-based analysis platform forNicotiana benthamianagenome and transcriptome. 2023
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Naoki Yokotani, Yoshinori Hasegawa, Yusuke Kouzai, Hideki Hirakawa, Sachiko Isobe. Transcriptome analysis of tomato plants following salicylic acid-induced immunity against Clavibacter michiganensis ssp. michiganensis. Plant Biotechnology. 2023
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Hisako Ichihara, Manabu Yamada, Mitsuyo Kohara, Hideki Hirakawa, Andrea Ghelfi, Takuro Tamura, Akihiro Nakaya, Yasukazu Nakamura, Sachiko Shirasawa, Samatchaya Yamashita, et al. Plant GARDEN: a portal website for cross-searching between different types of genomic and genetic resources in a wide variety of plant species. BMC plant biology. 2023. 23. 1. 391-391
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Jeffrey A Fawcett, Ryoma Takeshima, Shinji Kikuchi, Euki Yazaki, Tomoyuki Katsube-Tanaka, Yumei Dong, Meifang Li, Harriet V Hunt, Martin K Jones, Diane L Lister, et al. Genome sequencing reveals the genetic architecture of heterostyly and domestication history of common buckwheat. Nature plants. 2023
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Ken-Ichi Kurotani, Hideki Hirakawa, Kenta Shirasawa, Yasuhiro Tanizawa, Yasukazu Nakamura, Sachiko Isobe, Michitaka Notaguchi. Genome Sequence and Analysis of Nicotiana benthamiana, the Model Plant for Interactions between Organisms. Plant & cell physiology. 2023. 64. 2. 248-257
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MISC (367):
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河野徳昭, 平川英樹, 山本和彦, 熊谷健夫, 渕野裕之, 川原信夫, 川原信夫, 由井秀紀, 金子倫久, 高田泰生, et al. Exploration of Flowering Regulator Genes in Swertia japonica Makino (3). 日本薬学会年会要旨集(Web). 2023. 143rd
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市原寿子, 小原光代, 山下サマッチャヤー, 山田学, 清水武彦, 白澤沙知子, 戸田陽介, 平川英樹, 中村保一, 中村保一, et al. Improvement of Plant GARDEN, a portal site for plant genome information (2023, Q2 ver). 育種学研究. 2023. 25
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大田竜也, FAWCETT J., 竹島亮馬, 菊池真司, 大迫敬義, 白澤健太, 法月美悠, 松井勝弘, 矢崎裕規, 木曽映里, et al. Buckwheat genome project-outline and perspectives-. 育種学研究. 2023. 25
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竹島亮馬, FAWCETT J., 松井勝弘, 水野信之, 松本大生, 平川英樹, 大田竜也, 安井康夫. Genetic architecture of heteromorphic self-incompatibility in common buckwheat. 育種学研究. 2023. 25
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松井勝弘, 大島良美, 光田展隆, 坂本真吾, FAWCETT J., 平川英樹, 大田竜也, 安井康夫. Flavonoid biosynthesis and regulatory system revealed by genome sequencing in buckwheat. 育種学研究. 2023. 25
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Patents (1):
Lectures and oral presentations (3):
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針葉樹4種のゲノム情報データベースBreedingTrees-by-Genesの構築
(第134回 日本森林学会大会 2023)
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菌根菌叢・細菌叢同定ウェブインターフェースの開発
(第17回 日本ゲノム微生物学会年会 2023)
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Construction of spinach pseudomolecules to enhance breeding efficiency
(2020)
Education (3):
- 1996 - 1999 Kyushu University
- 1994 - 1996 Kyushu University
- 1990 - 1994 Kyushu University School of Agriculture
Work history (13):
- 2022/04 - 現在 Kazusa DNA Research Institute
- 2021/08 - 現在 Japan Aerospace Exploration Agency
- 2019/04 - 現在 Tohoku University
- 2018/03 - 2022/03 Kazusa DNA Research Institute
- 2013/04 - 2019/03 Tohoku University Graduate School of Life Sciences
- 2014/04 - 2018/03 Kazusa DNA Research Institute
- 2011/04 - 2014/03 Kazusa DNA Research Institute
- 2009/04 - 2011/03 The University of Tokyo Graduate School of Frontier Sciences Department of Computational Biology
- 2009/04 - 2011/03 Kazusa DNA Research Institute
- 2008/04 - 2009/03 Kyushu University
- 2007/04 - 2008/03 Kyushu University
- 2003/10 - 2007/03 Kyushu University
- 1999/05 - 2003/09 Kyushu University
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