- 2022 - 2026 海底下の「静かな」微生物進化
- 2020 - 2023 Analysis of emerging process of enterohemorrhagic escherichia coli
- 2020 - 2023 多個体ハプロタイプ解析による超高ヘテロ接合性生物圏の実態解明
- 2018 - 2021 Development of an analysis pipeline for allele-specific genome dynamics based on haplotype sequences
- 2016 - 2021 Platform for Advanced Genome Science
- 2017 - 2020 Emerging process of Enterohemorrhagic Escherichia coli revealed by a large-scale genome analysis
- 2016 - 2019 Development of haplotype phased genome assembler
- 2015 - 2017 Development of an assembly method for whole genomes of polyploid organisms
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