Shimizu Kentaro K

Affiliation and department：
Job title： Full Professor
Other affiliations (1)：

Yokohama City University

Homepage URL (1)： http://www.ieu.uzh.ch/en/staff/professors/shimizu.html

Research field (5)： Ecology and environmental science , Developmental biology , Plants: molecular biology and physiology , Genomics , Evolutionary biology

Research keywords (4)： Molecular Ecology , Evolutionary Biology , Plant Sexual Reproduction , Evolutionary and ecological genomics

Research theme for competitive and other funds (8)：

2022 - 2027 Genomic dynamics underlying the plastic hermaphroditism in plants: the basis of exploratory reproductive adaptations
2022 - 2027 受粉時における自殖性と他殖性の質的・量的バランスを制御する分子機構と選択圧
2022 - 2025 パンコムギの品種間シス制御の違いを利用した新規対立遺伝子の単離
2021 - 2023 The study of diffusion and altitudinal adaptation of East Asian wheat by integrating genome science and archaeology
2016 - 2021 Comprehensive analysis of omics adaptability in hybrid species

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Papers (134)：

Yasuyuki Nomura, Moeko Okada, Toshiaki Tameshige, Shotaro Takenaka, Kentaro K Shimizu, Shuhei Nasuda, Atsushi J Nagano. Modeling of transcriptomic variation among subgenomes in 25 accessions of common wheat reveals cis- and trans-regulation architectures. 2024
Yasuhiro Sato, Rie Shimizu-Inatsugi, Kazuya Takeda, Bernhard Schmid, Atsushi J Nagano, Kentaro K Shimizu. Reducing herbivory in mixed planting by genomic prediction of neighbor effects in the field. Nature communications. 2024. 15. 1. 8467-8467
Ingrid Olivares, Sergio Tusso, María José Sanín, Marylaure de La Harpe, Oriane Loiseau, Jonathan Rolland, Nicolas Salamin, Michael Kessler, Kentaro K. Shimizu, Margot Paris. Hyper-Cryptic radiation of a tropical montane plant lineage. Molecular Phylogenetics and Evolution. 2024
Athene Giesen, Wolf U. Blanckenhorn, Martin A. Schäfer, Kentaro K. Shimizu, Rie Shimizu-Inatsugi, Bernhard Misof, Lars Podsiadlowski, Oliver Niehuis, Heidi E. L. Lischer, Simon Aeschbacher, et al. Geographic Variation in Genomic Signals of Admixture Between Two Closely Related European Sepsid Fly Species. Evolutionary Biology. 2023
Chow-Lih Yew, Takashi Tsuchimatsu, Rie Shimizu Inatsugi, Shinsuke Yasuda, Masaomi Hatakeyama, Hiroyuki Kakui, Takuma Ohta, Keita Suwabe, Masao Watanabe, Seiji Takayama, et al. Dominance in self-compatibility between subgenomes of allopolyploid Arabidopsis kamchatica shown by transgenic restoration of self-incompatibility. Nature Communications. 2023. 14. 7618

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MISC (104)：

吉岡俊輔, 黒木健, 黒木健, 新田みゆき, NIE J., 石井昌範, 角井宏行, 岡田萌子, 岡田萌子, 岡田萌子, et al. A high-throughput phenotyping of the hexaploid wheat NAM population during tillering stage by UAVs and their correlation with yield-related traits. 育種学研究. 2023. 25
田渕雅啓, 岡田萌子, 岡田萌子, 岡田萌子, 道川麻美, 井上喜博, 西村和紗, 水野信之, 清水健太郎, 清水健太郎, et al. Alien chromosome fragment introgression to Triticum aestivum L. using Pairing homoeologous 2 deletion lines. 育種学研究. 2023. 25
徳本雄史, 徳本雄史, 徳本雄史, 永井信, 久米朋宣, 清水健太郎, 清水健太郎. Multi-species transcriptomic analysis for the community-wide phenology in Southeast Asia. 日本生態学会大会講演要旨(Web). 2022. 69th
角井宏行, 土松隆志, 山崎美紗子, 清水健太郎, 清水健太郎. 花粉数を制御する遺伝子の発見. バイオサイエンスとインダストリー. 2021. 79. 1
清水健太郎, 清水健太郎, 半田裕一, 半田裕一, 那須田周平, 瀬々潤, 瀬々潤, 川浦香奈子, 辻寛之, 爲重才覚, et al. de novo genome assembly of a Japanese wheat cultivar Norin 61 in the international wheat 10+ genomes project. 育種学研究. 2020. 22

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Books (1)：

植物の進化-基本概念からモデル生物を活用した比較・進化ゲノム学まで (細胞工学別冊-植物細胞工学シリーズ)
秀潤社 2007 ISBN:4879623539

Education (2)：

1997 - 2002 Kyoto University Graduate School of Science
1993 - 1997 Kyoto University Faculty of Science

Professional career (1)：

PhD (Kyoto University)

Work history (8)：

2024/02 - 現在 University of Zurich Department of Evolutionary Biology and Environmental Studies Director
2021/01 - 現在 Universtiy of Zurich Universtiy Research Priority Program "Evolution in Action" Co-Directoer
2015/10 - 現在 Yokohama City University Kihara Institute for Biological Research Guest Professor
2011/12 - 現在 University of Zurich, Switzerland Department of Evolutionary Biology and Environmental Studies Professor
2015/07 - 2015/12 Kyoto University Center for Ecological Research Visiting Professor

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Awards (2)：

2016/02 - Ministry of Education, Culture, Sports, Science and Technology, National Institute of Science and Technology Policy Nistep Award
1999 - Pollen-Stigma Interactions, a conference dedicated to the memory of Jack Heslop-Harrison Jack Heslop-Harrison Medal for best poster Attractive and repulsive pollen tube guidance signal in Arabidopsis and in interspecific incompatible crosses

Association Membership(s) (3)：

日本植物学会 , 日本植物生理学会 , 日本進化学会

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