J-GLOBAL ID:201610013506546136   Research Resource code:NBDC01596 Update date:Mar. 12, 2020


Owning Organization:
  • EMBL-EBI (European Bioinformatics Institute)
Resource classification: Data,Database
Tag (subject)  (2): Genome/Gene ,  Organism
Tag (data type)  (3): Sequence ,  Taxonomy ,  Classification
Species (4): Metazoa (NCBI Taxonomy ID: 33208) ,  Ascomycota (NCBI Taxonomy ID: 4890) ,  Salpingoecidae (NCBI Taxonomy ID: 81529) ,  Arabidopsis thaliana (NCBI Taxonomy ID: 3702)
TreeFam is a database of phylogenetic trees inferred from animal genomes. It provides the following information about the TreeFam gene family:
1) Summary page
Textual background information on the TreeFam gene family
2) Trees
Reconciled gene tree
3) Alignment
An alignment of all homologous sequences in the TreeFam family
4) Sequences
Information about sequences in the TreeFam family, including e-values, Pfam domains, sequence description, and the species name
5) Species
Interactive tree graphic displaying species distribution for the full alignment.
Source: NBDC
Record maintainer: Integbio Database Catalog
Record license: Creative Commons CC0 license

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