J-GLOBAL ID:201610017682457552   Research Resource code:NBDC01582 Update date:Oct. 10, 2019

GeneSigDB: Gene Signature DataBase

GeneSigDB: Gene Signature DataBase
Owning Organization:
  • Dana-Farber Cancer Institute
Resource classification: Data,Database
Tag (subject)  (2): Genome/Gene ,  Health/Disease
Tag (data type)  (3): Expression ,  Ontology/Terminology/Nomenclature ,  Bibliography/Documents
Species (3): Homo sapiens (NCBI Taxonomy ID: 9606) ,  Mus musculus (NCBI Taxonomy ID: 10090) ,  Rattus (NCBI Taxonomy ID: 10114)
geneSigDB is a database of fully traceable, standardized, annotated gene signatures which have been manually curated from published literatures. Data were collected from published articles which largely focused on gene expression in cancer, stem cells, immune cells, development and lung disease. Users can analyze geneSigDB gene signatures, or upload their own gene list and results can be viewed on a dynamic editable heatmap. All data can be downloaded in numerous formats including .gmt file format for gene set enrichment analysis or as a R/Bioconductor data file.
Source: NBDC
Record maintainer: Integbio Database Catalog
Record license: Creative Commons CC0 license

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