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J-GLOBAL ID：201702274542687735   Reference number：17A0744035

Imputation approach for deducing a complete mitogenome sequence from low-depth-coverage next-generation sequencing data: application to ancient remains from the Moon Pyramid, Mexico

深度の低いカバー率の次世代シークエンシングデータから完全ミトゲノムシークエンスを推測するための補完アプローチ

Author (9)： MIZUNO Fuzuki (Toho Univ. School of Medicine, Tokyo, JPN) ,  MIZUNO Fuzuki (Univ. Tokyo, Tokyo, JPN) ,  KUMAGAI Masahiko (Univ. Tokyo, Tokyo, JPN) ,  KUROSAKI Kunihiko (Toho Univ. School of Medicine, Tokyo, JPN) ,  HAYASHI Michiko (Toho Univ. School of Medicine, Tokyo, JPN) ,  SUGIYAMA Saburo (Aichi Prefectural Univ., Aichi, JPN) ,  UEDA Shintaroh (Univ. Tokyo, Tokyo, JPN) ,  UEDA Shintaroh (Hangzhou Normal Univ. School of Medicine, Zhejiang, CHN) ,  WANG Li (Hangzhou Normal Univ. School of Medicine, Zhejiang, CHN)
Material： Journal of Human Genetics  (J Hum Genet)
Volume： 62  Issue： 6  Page： 631-635  Publication year： Jun. 2017 
JST Material Number： Z0756A  ISSN： 1434-5161  Document type： Article
Article type： 原著論文  Country of issue： United Kingdom (GBR)  Language： ENGLISH (EN)

Thesaurus term： *genome ,...
Semi thesaurus term： blood relationship

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JST classification (2)： Structure and chemistry of genes  (EC02020U) ,  Anthropology  (EA01070K)

Reference (32)：

• Smith, D. R. The past, present and future of mitochondrial genomics: have we sequenced enough mtDNAs?. Brief Funct. Genomics 15, 47-54 (2016).
• Mizuno, F., Gojobori, J., Wang, L., Onishi, K., Sugiyama, S., Granados, J. et al. Complete mitogenome analysis of indigenous populations in Mexico: its relevance for the origin of Mesoamericans. J. Hum. Genet. 59, 359-367 (2014).
• Gojobori, J., Mizuno, F., Wang, L., Onishi, K., Granados, J., Gomez-Trejo, C. et al. mtDNA diversity of the Zapotec in Mexico suggests a population decline long before the first contact with Europeans. J. Hum. Genet. 160, 557-559 (2015).
• Adler, C. J., Haak, W., Donlon, D. & Cooper, A. Survival and recovery of DNA from ancient teeth and bones. J. Arch. Sci. 38, 956-964 (2011).
• Reed, F. A., Kontanis, E. J., Kennedy, K. A. & Aquadro, C. F. Brief communication: ancient DNA prospects from Sri Lankan highland dry caves support an emerging global pattern. Am. J. Phys. Anthropol. 121, 112-116 (2003).

Terms in the title (5)： 深度 ,  次世代シークエンシング ,  ゲノムシークエンス ,  推測 ,  補完