Kato Shingo

カトウシンゴ | Kato Shingo

Affiliation and department：
Job title： Senior Scientist
Homepage URL (1)： http://www.jcm.riken.jp/JCM/staff/skato/index.html

Research field (6)： Applied microbiology , Molecular biology , Genomics , Biological resource conservation , Biodiversity and systematics , Ecology and environmental science

Research keywords (11)：好熱菌 , 分離培養 , 難培養微生物 , 微生物ダークマター , DPANN , CPR , Metagenomics , Iron-oxidizing bacteria , Archaea , Extremophiles , Microbiology

Research theme for competitive and other funds (13)：

2024 - 2028 Primitive microorganisms addressed by cultivation of acidophilic sulfate-reducing bacteria
2023 - 2027 Investigation of complex factors controlling arsenic accumulation in surface paddy soils and its application to nature-mimetic soil remediation
2023 - 2027 Investigation of complex factors controlling arsenic accumulation in surface paddy soils and its application to nature-mimetic soil remediation
2022 - 2025 絶対共生性「CPRバクテリア群/DPANNアーキア群」を標的にした革新的培養戦略
2022 - 2024 Searching for preferential orientations of magnetic fossils in rocks: possible clues to paleomagnetism and bacterial ecology

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Papers (70)：

Sakurako Goto-Ito, Shingo Kato, Mari Takahashi, Ayako Sakamoto, Atsushi Yamagata, Yongchan Lee, Haruhiko Ehara, Mayuko Sato, Kiminori Toyooka, Moriya Ohkuma, et al. Structural analysis of a symbiotic system involving a Nanobdellati archaeon by cryo-electron tomography. Journal of biochemistry. 2025
Satoshi Nakagawa, Hirokazu Yagi, Tomoki Suyama, Shigeru Shimamura, Saeko Yanaka, Maho Yagi-Utsumi, Shingo Kato, Moriya Ohkuma, Koichi Kato, Ken Takai. Exploring protein N -glycosylation in ammonia-oxidizing Nitrososphaerota archaea through glycoproteomic analysis. mBio. 2025
Tomoki Uchijima, Shingo Kato, Kazuya Tanimoto, Fumito Shiraishi, Natsuko Hamamura, Kohei Tokunaga, Hiroko Makita, Momoko Kondo, Moriya Ohkuma, Satoshi Mitsunobu. Custom-made medium approach for effective enrichment and isolation of chemolithotrophic iron-oxidizing bacteria. FEMS microbiology ecology. 2025. 101. 6
Hinako Takamiya, Mariko Kouduka, Shingo Kato, Hiroki Suga, Masaki Oura, Tadashi Yokoyama, Michio Suzuki, Masaru Mori, Akio Kanai, Yohey Suzuki. Genome-resolved metaproteogenomic and nanosolid characterization of an inactive vent chimney densely colonized by enigmatic DPANN archaea. The ISME journal. 2024. 18. 1
Nao Masuda, Shingo Kato, Moriya Ohkuma, Kazuyoshi Endo. Metagenomic Insights into Ecophysiology of Zetaproteobacteria and Gammaproteobacteria in Shallow Zones within Deep-sea Massive Sulfide Deposits. Microbes and environments. 2024. 39. 3

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MISC (47)：

Shingo Kato. Insights into early organisms from Nanobdellati archaea. Viva Origino. 2025. 52. 4. ID 7
加藤真悟, 伊藤隆, 大熊盛也. 新規好熱好酸性硫酸還元アーキアの発見とその意義. 日本Archaea研究会講演会要旨集. 2024. 36th
西原亜理沙, 加藤真悟, 大熊盛也. 培養だけじゃない!微生物材料拠点の構築とゲノム情報の活用. 日本微生物生態学会大会(Web). 2024. 37th
内島智貴, 加藤真悟, 濱村奈津子, 光延聖. 環境優占種の分離を目的とした新しい鉄酸化菌培養法「カスタマイズ培地法」の確立. 日本微生物生態学会大会(Web). 2024. 37th
加藤真悟. シングルセルソーティングによる新規温泉アーキアの網羅的分離培養およびリソース化. 発酵研究所助成研究報告集. 2024. 38. 136

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Books (2)：

Deep Sea: Biodiversity, Human Dimension and Ecological Significance
Nova Science Publishers 2014
Changing Diversity in Changing Environment
InTech 2011

Lectures and oral presentations (35)：

Release of online lists of JCM strains with various information
(The 13th ANRRC International Meeting (ANRRC 2022) 2022)
DPANNアーキア研究の最前線
(日本微生物生態学会第35回大会 2022)
提供可能な JCM 株の一覧表のオンライン公開
(日本微生物資源学会第28回大会 2022)
Novel bacterial players driving iron cycle in freshwater sediments
(JpGU2022 2022)
ロングリードメタゲノミクスによる未培養性温泉微生物の完全ゲノム再構築
(日本微生物生態学会第34回大会 2021)

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Education (1)：

- 2009 Tokyo University of Pharmacy and Life Sciences

Work history (6)：

2022/04 - 現在 RIKEN BRC Senior Scientist
2018/04 - 2022/03 RIKEN BRC
2015/09 - 2018/03 海洋研究開発機構特任研究員
2014/04 - 2015/08 デラウェア大学海外特別研究員
2011/04 - 2014/03 理化学研究所基礎科学特別研究員

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Committee career (5)：

2025 - 現在日本微生物資源学会学会誌編集委員
2024 - 現在日本微生物生態学会評議員
2019/07 - 現在日本Archaea研究会幹事
2020/04 - 2023/08 極限環境生物学会シンポジウム委員
2019/04 - 2023/03 微生物生態学会和文誌編集委員

Awards (6)：

2025/09 - 第11回日本微生物生態学会奨励賞
2022/11 - ANRRC 2022 Poster Award
2021/06 - 日本微生物資源学会第27回大会優秀発表賞
2019/11 - 極限環境生物学会研究奨励賞
2019/06 - 日本微生物資源学会第26回大会ベストプレゼンテーション賞

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Association Membership(s) (5)：

JAPAN GEOSCIENCE UNION , Japan Society for Archaea , Japan Society for Microbial Resources and Systematics , THE JAPANESE SOCIETY OF MICROBIAL ECOLOGY , JAPANESE SOCIETY FOR EXTREMOPHILES

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