2016 - 2019 Oligomer formation of amyloid-beta studied by new constant pH simulations
2012 - 2015 Oligomerization of amyloid beta-peptides studies by computer simulations
Papers (51):
Hisashi Okumura, Satoru G. Itoh, Heishun Zen, Kazuhiro Nakamura. Dissociation process of polyalanine aggregates by free electron laser irradiation. PLOS ONE. 2023. 18. 9. e0291093-e0291093
Maho Yagi-Utsumi, Satoru G. Itoh, Hisashi Okumura, Katsuhiko Yanagisawa, Koichi Kato, Katsuyuki Nishimura. The Double-Layered Structure of Amyloid-β Assemblage on GM1-Containing Membranes Catalytically Promotes Fibrillization. ACS Chemical Neuroscience. 2023. 14. 15. 2648-2657
Daiki Fukuhara, Masataka Yamauchi, Satoru G. Itoh, Hisashi Okumura. Ingenuity in performing replica permutation: How to order the state labels for improving sampling efficiency. JOURNAL OF COMPUTATIONAL CHEMISTRY. 2023. 44. 4. 534-545
Satoru G Itoh, Maho Yagi-Utsumi, Koichi Kato, Hisashi Okumura. Key Residue for Aggregation of Amyloid-β Peptides. ACS chemical neuroscience. 2022. 13. 22. 3139-3151
HISASHI OKUMURA, Satoru Itoh. Molecular Dynamics Simulation Studies on the Aggregation of Amyloid-β Peptides and Their Disaggregation by Ultrasonic Wave and Infrared Laser Irradiation. Molecules. 2022
S. G. Itoh, H. Okumura. Oligomerization pathway of A beta fragments by the Hamiltonian replica-permutation method. EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS. 2017. 46. S218-S218
S. G. Itoh, H. Okumura. Oligomerization process of A beta(29-42) by Coulomb replica-permutation MD simulations. EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS. 2015. 44. S147-S147
H. Okumura, S. G. Itoh. Nonequilibrium molecular dynamics simulations of amyloid disruption by ultrasonic cavitation. EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS. 2015. 44. S207-S207
OKUMURA Hisashi, Itoh Satoru G. 19aCT-4 Fluctuation and structure of Aβ amyloid fibril by molecular dynamics simulations. Meeting Abstracts of the Physical Society of Japan. 2015. 70. 3015-3015