Rchr
J-GLOBAL ID:201801012716341050   Update date: Jan. 24, 2021

Okazaki Yusuke

オカザキ ユウスケ | Okazaki Yusuke
Affiliation and department:
Homepage URL  (1): https://yusukeokazaki.weebly.com/
Research field  (4): Genomics ,  Evolutionary biology ,  Ecology and environmental science ,  Marine/Aquatic life sciences
Research keywords  (6): 細菌 ,  ウイルス ,  メタゲノム ,  琵琶湖 ,  陸水学 ,  微生物生態学
Research theme for competitive and other funds  (2):
  • 2018 - 2021 Ecogenomics of prokaryotes, viruses, and microbial eukaryotes in deep freshwater lakes
  • 2015 - 2018 琵琶湖深水層で優占する細菌系統CL500-11の生態解明
Papers (13):
  • Yusuke Okazaki, Shohei Fujinaga, Michaela M. Salcher, Cristiana Callieri, Atsushi Tanaka, Ayato Kohzu, Hideo Oyagi, Hideyuki Tamaki, Shin-ichi Nakano. Microdiversity and phylogeographic diversification of bacterioplankton in pelagic freshwater systems revealed through long-read amplicon sequencing. Microbiome. 2021. 9. 1
  • Koji Yahara, Masato Suzuki, Aki Hirabayashi, Wataru Suda, Masahira Hattori, Yutaka Suzuki, Yusuke Okazaki. Long-read metagenomics using PromethION uncovers oral bacteriophages and their interaction with host bacteria. Nature Communications. 2021. 12. 1
  • Ryosuke Nakadai, Yusuke Okazaki, Shunsuke Matsuoka. Describing macroecological patterns in microbes: Approaches for comparative analyses of operational taxonomic unit read number distribution with a case study of global oceanic bacteria. Environmental DNA. 2020. 2. 4. 535-543
  • Yusuke Okazaki, Yosuke Nishimura, Takashi Yoshida, Hiroyuki Ogata, Shin-ichi Nakano. Genome-resolved viral and cellular metagenomes revealed potential key virus-host interactions in a deep freshwater lake. Environmental Microbiology. 2019. 21. 12. 4740-4754
  • Satoshi Hiraoka, Yusuke Okazaki, Mizue Anda, Atsushi Toyoda, Shin-Ichi Nakano, Wataru Iwasaki. Metaepigenomic analysis reveals the unexplored diversity of DNA methylation in an environmental prokaryotic community. Nature communications. 2019. 10. 1. 159-159
more...
MISC (3):
  • 岡崎友輔. 一杯の湖水に秘められた難題. 生物工学会誌. 2020. 98. 11. 619
  • 岡崎友輔. ネオウイルス学に出会うまで. ネオウイルス学ニュースレター. 2019. 6. 3-5
  • 岡崎 友輔. Comment from award winner at 8th JSPS IKUSHI PRIZE. 陸水学雑誌 = Japanese journal of limnology. 2018. 79. 2. 127-129
Education (3):
  • 2015 - 2018 京都大学 理学研究科 生物科学専攻 博士課程
  • 2010 - 2012 京都大学 理学研究科 生物科学専攻 修士課程
  • 2006 - 2010 Kyoto University
Professional career (1):
  • 博士(理学) (京都大学)
Work history (4):
  • 2020/12 - 現在 Kyoto University Institute for Chemical Research
  • 2018/04 - 2020/11 日本学術振興会特別研究員(PD)
  • 2015/04 - 2018/03 日本学術振興会特別研究員(DC1)
  • 2012/04 - 2015/03 三菱総合研究所 研究員
Awards (1):
  • 2018/03 - 日本学術振興会 第8回 育志賞
Association Membership(s) (2):
日本陸水学会 ,  日本微生物生態学会
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