Hiromi Matsumae

Affiliation and department：
Job title： Lecturer
Homepage URL (1)： https://sites.google.com/site/hiromimatsumae/info

Research field (4)： Biological, health, and medical informatics , Genomics , Physical anthropology , Evolutionary biology

Research keywords (13)： Fungal genomics , ancient DNA , fungi , image processing , cultural evolution , language evolution , human evolution , Bioinformatics , Museomics , Population Genetics , Physical Anthropology , Computational Biology , Evolutionary Biology

Research theme for competitive and other funds (9)：

2021 - 2024 シン・パレオゲノミクスが創る博物館資料群活用の新展開
2021 - 2024 Anthropological Informatics: Integration of Biology and Cultural Studies
2020 - 2022 Evolution and diversification of human language comparing with human population history
2020 - 2022 Population genomics of pathogenic fungi
2021 - 2022 Population genomics of disease-related fungi

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Papers (19)：

Takashi Baba, Ryo Hagiuda, Hiromi Matsumae, Dai Hirose. Does the genome of Sarcoleotia globosa encode a rich carbohydrate-active enzyme gene repertoire?. Mycologia. 2025. 1-6
A pilot study on 3D Digitalization and archiving of the collection at the Institute of Civilization Research, Tokai University. 2025. 34. 27-38
Hiromi Matsumae, Megumi Sudo, Tadashi Imanishi, Tsuyoshi Hosoya. Image Analysis Characterizes Phenotypic Variation in the Growth of Mushroom-Forming Fungus Schizophyllum commune. Genes to Cells. 2024
Hiromi Matsumae, Megumi Sudo, Tadashi Imanishi, Tsuyoshi Hosoya. Easy-to-set-up image analysis characterizes phenotypic diversity in the growth of mushroom-forming fungus Schizophyllum commune. bioRxiv. 2024
北本朝展, 山花京子, 松前ひろみ, 鴨下真由, 小能治子, 生田目心愛. AI とオープンデータが人文学を変えるデジタル・ヒューマニティーズ -画像公開方式 IIIF や AI くずし字認識の発展から見えてくる人文学の新たな研究方法-. 文明. 2024. 32. 5. 57-78

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MISC (13)：

IIBMP2023ワークショップ「バイオインフォマティクスの8の問題」. 日本バイオインフォマティクス学会ニュースレター. 2024. 44
IIBMP2023ナイトセッション「君たちはどう生きるか」開催報告. 日本バイオインフォマティクス学会ニュースレター. 2024. 44
松前ひろみ. 進化学×ダイバーシティサイエンスに熱中できる学会の場を ~育児世代の試みから~. 日本進化学会ニュース ISSN2187-789X. 2023. 24. 3. 18-23
Evolutionary Science x Diversity. 2023. 24. 1. 32-45
坂本美佳, 松前ひろみ, 小木曽映里, 望月孝子, 谷澤靖洋, KRYUKOV Kirill, 今西規, 豊田敦, 亀井克彦, 細矢剛, et al. De novo gene annotation highlights differences in genomic compositions among Schizophyllum commune strains. 日本分子生物学会年会プログラム・要旨集(Web). 2023. 46th

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Patents (2)：

商品管理システム及び方法並びにその商品管理システムに用いられる管理装置及び情報端末装置
情報提供装置、携帯端末装置、並びに、買物支援システム

Books (2)：

Frontier of Utilization of Big Data in Life Sciences
2014
RikaTan 特集:進化論の目で生物を見よう!
星の環会 2008

Lectures and oral presentations (61)：

Intraspecific variation in temperature response of the Japanese Schizophyllum commune revealed by image analysis
(the 2023 Annual Meeting of the Mycological Society of Japan (MSJ) 2025)
菌類ゲノムの探検: 身近なキノコ・スエヒロタケの知られざる姿
(日本菌学会第69回大会(千葉)、公開シンポジウム 2025)
核酸抽出の困難を乗り越えて菌類の遺伝的多様性と表現型多様性の謎に挑む
(生物多様性のDNA情報学 2025)
Characterizing phenotypic and genetic diversity in the wood-decay fungus, Schizophyllum commune, a cause of allergic bronchopulmonary mycosis (ABPM), through image analysis and genomics.
(1st Asia & Pacific Bioinformatics Joint Conference (APBJC), Japan 2024)
Visualizing human impact on plant transmission from linguistic data
(Cultural Evolution Society (CES) Conference 2024 2024)

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Works (1)：

COSOPT
Matsumae Hiromi 2015 -

Education (4)：

2008 - 2012 Tokyo Medical and Dental University
2006 - 2008 Tokyo Medical and Dental University Biomedical Science PhD Program
2005 - 2006 Tokyo Medical and Dental University Medical Research Institute
2001 - 2005 Tokai University

Professional career (1)：

博士(医学) (東京医科歯科大学)

Work history (11)：

2025/04 - 現在 TOYOTA KONPON RESEARCH INSTITUTE, INC.
2024/04 - 現在 Tokai University Department of Molecular Life Sciences, School of Medicine Lecturer
2020/04 - 2024/03 Tokai University Department of Molecular Life Science, School of Medicine Assistant Professor
2022/06 - 2022/09 Hokkaido University Center for Human Nature, Artificial Intelligence, and Neuroscience Part-time Lecturer
2018/04 - 2020/03 Tokai University Department of Molecular Life Science, School of Medicine Research Project Assistant Professor

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Committee career (5)：

2024/04 - 現在 Japanese Society of Bioinformatics Managers (DEI)
2023/06 - 現在日本進化学会ニュースレター編集委員
2022/07 - 現在 Society of Evolutionary Studies, Japan Councilor
2023 - 2024 日本進化学会日本進化学会2024年神奈川大会実行委員会
2021/06 - Cultural Evolution Society Conference 2020 Sapporo Scientific Committee & Inclusive Committee

Awards (2)：

2020 - Information Processing Society of Japan IPSJ Yamashita SIG Research Award Culture x Bio x Computer
2003 - 文部科学省、特許庁、日本弁理士会及び(社)発明協会プレパテントコンテスト入賞

Association Membership(s) (7)：

JAPANESE SOCIETY FOR BIOINFORMATICS , Society for Molecular Biology and Evolution , THE ANTHROPOLOGICAL SOCIETY OF NIPPON , SOCIETY OF EVOLUTIONARY STUDIES, JAPAN , 日本分子生物学会 , 日本菌学会 , 情報処理学会

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