Inoue Jun

Affiliation and department：
Homepage URL (1)： http://www.fish-evol.org/index.html

Research field (2)： Genomics , Molecular biology

Research keywords (4)： Chordata , Actinopterygii , Genome comparison , Molecular Phylogenetics

Research theme for competitive and other funds (6)：

2021 - 2026 A move for sea subtropicalization: development of a marine organism map by environmental DNA analyses
2018 - 2020 核ゲノム解析による進化速度の速い種の系統的位置決定:尾索動物オタマボヤ類を例に
2015 - 2018 脊椎動物の全ゲノム比較解析を可能にする統合オーソログ判定パイプラインの構築
2012 - 2016 核ゲノムデータを用いた条鰭類の系統解析に向けて:相同遺伝子選定パイプラインの構築
2005 - 2007 脊椎動物ミトコンドリアゲノムの新たな分子進化モデル開発:より正確な系統推定の試み

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Papers (56)：

Jun Inoue, Chuya Shinzato, Junya Hirai, Sachihiko Itoh, Yuki Minegishi, Shin-Ichi Ito, Susumu Hyodo. phyloBARCODER: A web tool for phylogenetic classification of eukaryote metabarcodes using custom reference databases. Molecular biology and evolution. 2024
Zeshu Yu, Marty Kwok-Shing Wong, Jun Inoue, Sk Istiaque Ahmed, Tomihiko Higuchi, Susumu Hyodo, Sachihiko Itoh, Kosei Komatsu, Hiroaki Saito, Shin-ichi Ito. Environmental DNA in the Kuroshio reveals environment-dependent distribution of economically important small pelagic fish. Frontiers in Marine Science. 2023. 10
Akiko Isomoto, Eiichi Shoguchi, Kanako Hisata, Jun Inoue, Yinrui Sun, Kenji Inaba, Noriyuki Satoh, Tomohisa Ogawa, Hiroki Shibata. Active Expression of Genes for Protein Modification Enzymes in Habu Venom Glands. Toxins. 2022. 14. 5. 300-300
Nina Yasuda, Jun Inoue, Michael R. Hall, Manoj R. Nair, Mehdi Adjeroud, Miguel D. Fortes, Mutsumi Nishida, Nat Tuivavalagi, Rachel Ravago-Gotanco, Zac H. Forsman, et al. Two Hidden mtDNA-Clades of Crown-of-Thorns Starfish in the Pacific Ocean. Frontiers in Marine Science. 2022. 9
Zeshu Yu, Shin-Ichi Ito, Marty Kwok-Shing Wong, Susumu Yoshizawa, Jun Inoue, Sachihiko Itoh, Ryuji Yukami, Kazuo Ishikawa, Chenying Guo, Minoru Ijichi, et al. Comparison of species-specific qPCR and metabarcoding methods to detect small pelagic fish distribution from open ocean environmental DNA. PloS one. 2022. 17. 9. e0273670

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MISC (3)：

Jun Inoue. Commentary on ORTHOSCOPE: a web tool for genome comparisons. Journal of Genetics and Genomes. 2021
Miller MJ, Kawakami Y, Aoyama J, Inagaki T, Oya M, Shinoda A, Sameshima M, Inoue J, Kawai M, Marquet G, et al. Distribution, abundance and life history characteristics of the anguilliform leptocephali in the Celebes and Sulu Seas during the KH-00-1-cruise. Preliminary report of the R/V Hakuho Maru Cruise KH-00-1. Ocean research institute The university of Tokyo. 2003. 39-47
井上潤, 宮正樹. ウナギ属 Anguilla の進化的起源. 海洋と生物. 133. 153-159

Books (2)：

Lectures and oral presentations (13)：

A comparative genome analysis of chordates using a web tool ORTHOSCOPE estimating the origins and functions genes
(2019)
脊索動物の系統進化とゲノム進化
(東京大学大気海洋研究所・海洋生命科学部門セミナー 2018)
脊索動物の系統進化とゲノム進化
(JT 生命誌研究館 2018)
海を支配する真骨魚類のゲノム再編と爆発的な多様化の関係
(NGS現場の会第五回研究会 2017)
Selection of gene markers for teleost phylogenetics considering the whole genome duplication and the species tree
(中央水産研究所 2016)

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Education (3)：

Professional career (1)：

Work history (12)：

2022/10 - 現在 The University of Tokyo Atmosphere and Ocean Research Institute
2020/05 - 2022/09 東京大学大気海洋研究所地球表層圏変動研究センター助教
2019/07 - 2020/04 National Institute of Genetics
2019/04 - 2019/06 National Institute of Genetics
2016/04 - 2019/03 Okinawa Institute of Science and Technology Graduate University

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Awards (4)：

2016/08 - The Society of Evolutionary Studies, Japan Young Scientist Initiative Award
2014/10 - Database Center for Life Science Open science award
2011/07 - The Society of Evolutionary Studies, Japan The Award for Education and Enlightenment
2006/10 - The Ichthyological Society of Japan Encouraging prize

Association Membership(s) (3)：

THE ZOOLOGICAL SOCIETY OF JAPAN , SOCIETY OF EVOLUTIONARY STUDIES, JAPAN , THE ICHTHYOLOGICAL SOCIETY OF JAPAN

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