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J-GLOBAL ID：201802278555931379   Reference number：18A0410984

水分野におけるビッグデータの活用 環境微生物学におけるビッグデータの活用

Author (1)： MATSUDA TOMONARI (京大 大学院工学研究科 流域圏総合環境質研究セ)
Material： 水環境学会誌  (Journal of Japan Society on Water Environment)
Volume： 41(A)  Issue： 2  Page： 65-67  Publication year： Feb. 10, 2018 
JST Material Number： Z0777A  ISSN： 0916-8958  Document type： Article
Article type： 解説  Country of issue： Japan (JPN)  Language： JAPANESE (JA)

Thesaurus term： Environment ,...
Semi thesaurus term： bioinformatics analysis ,...

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JST classification (3)： Research methods in genetics  (EC01020N) ,  Microorganism ecology  (EG03040J) ,  Molecular and genetic information processing  (JE15040B)

Reference (13)：

• Wu, W., Huang, H., Ling, Z., Yu, Z., Jiang, Y., Liu, P., Li, X., 2016. Genome sequencing reveals mechanisms for heavy metal resistance and polycyclic aromatic hydrocarbon degradation in Delftia lacustris strain LZ-C. Ecotoxicology 25, 234-247.
• Gomi, R., Matsuda, T., Matsumura, Y., Yamamoto, M., Tanaka, M., Ichiyama, S., Yoneda, M., 2017. Whole-genome analysis of antimicrobial-resistant and extraintestinal pathogenic escherichia coli in river water. Applied Environmental Microbiology 83, e02703-16.
• Oulas, A., Pavloudi, C., Polymenakou, P., Pavlopoulos, G.A., Papanikolaou, N., Kotoulas, G., Arvanitidis, C., Iliopoulos, I., 2015. Metagenomics: tools and insights for analyzing next-generation sequencing data derived from biodiversity studies. Bioinformatics and Biology Insights 9, 75-88.
• Tatusova, T., DiCuccio, M., Badretdin, A., Chetvernin, V., Nawrocki, E.P., Zaslaysky, L., Lomsadze, A., Pruitt, K.D., Borodovsky, M., Ostell, J., 2016. NCBI prokaryotic genome annotation pipeline. Nucleic Acids Research 44, 6614-6624.
• Yu, K., Zhang, T., 2012. Metagenomic and metatranscriptomic analysis of microbial community structure and gene expression of activated sludge. PLoS One 7, e38183.

Terms in the title (4)： 水 ,  ビッグデータ ,  活用 ,  環境微生物学