J-GLOBAL ID:201810011669452777   Research Resource code:NBDC02362 Update date:Mar. 12, 2020

CoDNaS: Conformational diversity of Native State database

CoDNaS: Conformational diversity of Native State database
Owning Organization:
  • Structural Bioinformatics Group, National University of Quilmes
Resource classification: Data,Database
Tag (subject)  (1): Protein
Tag (data type)  (2): 3D structure ,  Classification
Species (7): Bacteria (NCBI Taxonomy ID: 2) ,  Eukaryota (NCBI Taxonomy ID: 2759) ,  Archaea (NCBI Taxonomy ID: 2157) ,  Avsunviroidae (NCBI Taxonomy ID: 185752) ,  Pospiviroidae (NCBI Taxonomy ID: 185751) ,  unclassified viroids (NCBI Taxonomy ID: 265963) ,  Viruses (NCBI Taxonomy ID: 10239)
CoDNaS is a database of redundant crystallographic structures for a given protein extensively linked with structural, biological and physicochemical information. For each protein as derived from PDB, the database contains the redundant collection of all corresponding different structures. As a measure of protein conformational diversity (PCD), the RMSD are obtained comparing all the structures deposited for each protein.
This database allows to browse by CATH hierarchy or search by PDB ID, Uniprot ID, CATH, conformational diversity, experimental method, etc..
Source: NBDC
Record maintainer: Integbio Database Catalog
Record license: Creative Commons CC0 license

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