Kawaji Hideya

Affiliation and department：
Job title： Associate Center Director
Other affiliations (1)：

RIKEN RIKEN Center for Integrative Medical Sciences

Research field (1)： Systems genomics

Research theme for competitive and other funds (7)：

2021 - 2024 Evaluating the role of cis-regulatory tandem DNA repeats in human disease and evolution
2020 - 2024 Elucidation for genetic regulation of enhancer expression and interpretation of genetic architecture in autoimmune diseases
2016 - 2021 Reverse engineering of transcriptional regulatory regions through data modeling of transcription initiation activities
2016 - 2018 Development of a genomics data sharing platform in Asia
2015 - 2018 Identification of biomarkers to diagnose lymph node metastasis based on gene expression patterns in primary lesion of endometrial carcinoma

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Papers (167)：

Kosuke Yamazaki, Tomohiro Iguchi, Yutaka Kanoh, Kazuto Takayasu, Trinh Thi To Ngo, Ayaka Onuki, Hideya Kawaji, Shunji Oshima, Tomomasa Kanda, Hisao Masai, et al. Homologous recombination contributes to the repair of acetaldehyde-induced DNA damage. Cell cycle (Georgetown, Tex.). 2024. 1-16
Yuta Ueno, Emiko Yoshida, Shuko Nojiri, Tomoyasu Kato, Takashi Ohtsu, Toshiyuki Takeshita, Shunji Suzuki, Hiroshi Yoshida, Ken Kato, Masayoshi Itoh, et al. Use of clinical variables for preoperative prediction of lymph node metastasis in endometrial cancer. Japanese journal of clinical oncology. 2024. 54. 1. 38-46
Takuya Kuroda, Satoshi Yasuda, Satoko Matsuyama, Takumi Miura, Rumi Sawada, Akifumi Matsuyama, Yumiko Yamamoto, Masaki Suimye Morioka, Hideya Kawaji, Takeya Kasukawa, et al. ROR2 expression predicts human induced pluripotent stem cell differentiation into neural stem/progenitor cells and GABAergic neurons. Scientific reports. 2024. 14. 1. 690-690
Akari Nakamura, Seiichiro Sakai, Yoshitaka Taketomi, Jun Tsuyama, Yoshimi Miki, Yuichiro Hara, Nobutaka Arai, Yuki Sugiura, Hideya Kawaji, Makoto Murakami, et al. PLA2G2E-mediated lipid metabolism triggers brain-autonomous neural repair after ischemic stroke. Neuron. 2023. 111. 19. 2995-3010
Francisco J Pardo-Palacios, Dingjie Wang, Fairlie Reese, Mark Diekhans, Sílvia Carbonell-Sala, Brian Williams, Jane E Loveland, Maite De María, Matthew S Adams, Gabriela Balderrama-Gutierrez, et al. Systematic assessment of long-read RNA-seq methods for transcript identification and quantification. bioRxiv : the preprint server for biology. 2023

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MISC (35)：

遺伝子モデルと核酸医薬創薬に資するゲノム・RNAデータベース. 2020. 78. 2
廣瀬直毅, 廣瀬直毅, 依馬正次, 佐々木えりか, GUSEV Oleg, GUSEV Oleg, 河合純, 村川泰裕, 村川泰裕, 川路英哉, et al. 非ヒト霊長類のトランスクリプトーム・アトラス. 日本分子生物学会年会プログラム・要旨集(Web). 2020. 43rd
高持一矢, 茂櫛薫, 林大久生, 川路英哉, 伊藤昌可, 林崎良英, 鈴木健司. 腫瘍免疫と微小環境非小細胞肺癌における免疫関連分子の包括的遺伝子発現解析. 肺癌. 2019. 59. 6. 576-576
高持一矢, 茂櫛薫, 林大久生, 川路英哉, 伊藤昌可, 林崎良英, 鈴木健司. 腫瘍免疫と微小環境非小細胞肺癌における免疫関連分子の包括的遺伝子発現解析. 肺癌. 2019. 59. 6. 576-576
大橋文哉, 大橋文哉, 大橋文哉, 宮川繁, 安田智, 三浦巧, 黒田拓也, 伊藤昌可, 川路英哉, 伊東絵望子, et al. 心筋細胞に分化指向性を有するiPS細胞株を選択するためのバイオマーカーの探索. 日本再生医療学会総会(Web). 2019. 18th

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Books (1)：

RとBioconductorを用いたバイオインフォマティクス
丸善出版 2012 ISBN:9784621062500

Lectures and oral presentations (15)：

Genomics resource of non human primates: recent updates and future perspective
(43th annual meeting of the molecular biology society of Japan, 2020)
Functional Annotation of Non-Coding Genomic Regions of Non-Human Primates
(International Plant & Animal Genome XXVIII 2020)
Learn genomics from AI for interpreting GWAS findings, The 6th RIKEN-KI-SciLifeLab Symposium
(Biomedical Data for Artificial Intelligence 2019)
Intratumoral heterogeneity of multiple myeloma revealed by single-cell RNA sequencing, EMBO Workshop
(Single cell biology 2019)
転写開始点リファレンスデータセットの構築
(第42会MBSJ 2019)

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Work history (1)：

2023/04 - 現在 RIKEN RIKEN Center for Integrative Medical Sciences

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