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J-GLOBAL ID：201902235522500065   Reference number：19A2626294

Construction of a core collection of eggplant (Solanum melongena L.) based on genome-wide SNP and SSR genotypes

ゲノムワイドSNPおよびSSR遺伝子型に基づくナス(Solanum melongena L.)のコアコレクションの構築

Author (6)： Miyatake Koji (Institute of Vegetable and Floriculture Science (NIVFS), National Agriculture and Food Research Organization (NARO)) ,  Shinmura Yoshimi (Institute of Vegetable and Floriculture Science (NIVFS), National Agriculture and Food Research Organization (NARO)) ,  Matsunaga Hiroshi (Institute of Vegetable and Floriculture Science (NIVFS), National Agriculture and Food Research Organization (NARO)) ,  Fukuoka Hiroyuki (Institute of Vegetable and Floriculture Science (NIVFS), National Agriculture and Food Research Organization (NARO)) ,  Fukuoka Hiroyuki (Takii & Company, Limited) ,  Saito Takeo (Institute of Vegetable and Floriculture Science (NIVFS), National Agriculture and Food Research Organization (NARO))
Material： Breeding Science  (Breed Sci)
Volume： 69  Issue： 3  Page： 498-502(J-STAGE)  Publication year： 2019 
JST Material Number： Y0311B  ISSN： 1344-7610  Document type： Article
Article type： 原著論文  Country of issue： Japan (JPN)  Language： ENGLISH (EN)

Thesaurus term： *Solanum melongena ,...
Semi thesaurus term： genetic diversity

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Author keywords (6)： Solanum melongena L. ,  eggplant ,  core collection ,  SNP ,  SSR ,  database

JST classification (4)： Plant breeding in general  (FC02010K) ,  Vegetables  (FC03043X) ,  Genetics in general  (EC01010C) ,  Plant biochemistry  (EH01050J)

Reference (22)：

• Cericola, F., E. Portis, L. Toppino, L. Barchi, N. Acciarri, T. Ciriaci, T. Sala, G.L. Rotino and S. Lanteri (2013) The population structure and diversity of eggplant from Asia and the Mediterranean Basin. PLoS ONE 8: e73702.
• Chen, R., T. Hara, R. Ohsawa and Y. Yoshioka (2017) Analysis of genetic diversity of rapeseed genetic resources in Japan and core collection construction. Breed. Sci. 67: 239-247.
• De Beukelaer, H., P. Smýkal, G.F. Davenport and V. Fack (2012) Core Hunter II: fast core subset selection based on multiple genetic diversity measures using Mixed Replica search. BMC Bioinformatics 13: 312.
• Ebana, K., Y. Kojima, S. Fukuoka, T. Nagamine and M. Kawase (2008) Development of mini core collection of Japanese rice landrace. Breed. Sci. 58: 281-291.
• Evanno, G., S. Regnaut and J. Goudet (2005) Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol. Ecol. 14: 2611-2620.

Terms in the title (8)： ゲノム ,  SNP ,  SSR ,  遺伝子型 ,  ナス ,  Solanum ,  コアコレクション ,  構築