Art
J-GLOBAL ID:201902258205899711   Reference number:19A1650458

Shotgun Metagenomics of a Water Kefir Fermentation Ecosystem Reveals a Novel Oenococcus Species

水ケファー発酵生態系のショットガンメタゲノミクスは新規Oenococcus種を明らかにする【JST・京大機械翻訳】
Author (3):
Material:
Volume: 10  Page: 479  Publication year: 2019 
JST Material Number: U7080A  ISSN: 1664-302X  Document type: Article
Article type: 原著論文  Country of issue: Switzerland (CHE)  Language: ENGLISH (EN)
Abstract/Point:
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Water kefir is a fruity, sour,...
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Structure and chemistry of genes  ,  Microorganism ecology 
Reference (99):
  • Alneberg J., Bjarnason B. S., de Bruijn I., Schirmer M., Quick J., Ijaz U. Z., et al (2014). Binning metagenomic contigs by coverage and composition. Nat. Methods 11 1144-1146. doi: 10.1038/NMETH.3103
  • Altschul S. F., Gish W., Miller W., Myers E. W., Lipman D. J. (1990). Basic local alignment search tool. J. Mol. Biol. 215 403-410. doi: 10.1016/S0022-2836(05)80360-2
  • Andrews S. (2010). FastQC: A Quality Control Tool for High Throughput Sequence Data. Available at: http://www.bioinformatics.babraham.ac.uk/projects/fastqc/ doi: 10.1016/S0022-2836(05)80360-2
  • Badotti F., Moreira A. P. B., Tonon L. A. C., de Lucena B. T. L., Gomes F. D. O., Kruger R., et al (2014). Oenococcus alcoholitolerans sp. nov., a lactic acid bacteria isolated from cachaça and ethanol fermentation process. Antonie van Leeuwenhoek. 106 1259-1267. doi: 10.1007/s10482-014-0296-z
  • Bengtsson-Palme J., Ryberg M., Hartmann M., Branco S., Wang Z., Godhe A., et al (2013). Improved software detection and extraction of ITS1 and ITS2 from ribosomal ITS sequences of fungi and other eukaryotes for analysis of environmental sequencing data. Methods Ecol. Evol. 4 914-919. doi: 10.1111/2041-210X.12073
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