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J-GLOBAL ID：201902266798933062   Reference number：19A1564964

Selection of Transcripts Affecting Initial Growth Rate of Rice Backcrossed Inbred Lines Using RNA Sequencing Data

RNA配列データを用いたイネ戻し交雑近交系の初期成長速度に影響する転写産物の選択【JST・京大機械翻訳】

Author (8)： Fukuda Akari (Central Region Agricultural Research Center, National Agriculture and Food Research Organization, Joetsu, Japan) ,  Hirose Tatsuro (Central Region Agricultural Research Center, National Agriculture and Food Research Organization, Joetsu, Japan) ,  Aoki Naohiro (Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan) ,  Kondo Satoshi (Agriculture and Biotechnology Business Division, Toyota Motor Corporation, Miyoshi, Japan) ,  Yonekura Madoka (Agriculture and Biotechnology Business Division, Toyota Motor Corporation, Miyoshi, Japan) ,  Kataoka Tomomori (Kyushu Okinawa Agricultural Research Center, National Agriculture and Food Research Organization, Fukuoka, Japan) ,  Ohto Chikara (T-Frontier Division, Toyota Motor Corporation, Toyota, Japan) ,  Nagano Atsushi J. (Faculty of Agriculture, Ryukoku University, Otsu, Japan)
Material： Frontiers in Plant Science (Web)
Volume： 9  Page： 1880  Publication year： 2018 
JST Material Number： U7094A  ISSN： 1664-462X  Document type： Article
Article type： 原著論文  Country of issue： Switzerland (CHE)  Language： ENGLISH (EN)

Abstract/Point： Seedling growth is an importan...

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Thesaurus term： *RNA ,  nucleotide ,  Oryza ,  Transcriptome ,  *growth rate ,  low temperature ,  Heredity ,  *back cross ,  gene ,  Germination ,  breed ,  seedling ,  subset ,  regression model ,  *transcript

Author keywords (8)： eQTL ,  LASSO ,  Oryza sativa ,  qLTG3-1 ,  QTL ,  RNA-Seq ,  SG1 ,  transcriptome

JST classification (1)： Gene expression  (EC02040Q)

Reference (24)：

• Abe A., Takagi H., Fujibe T., Aya K., Kojima M., Sakakibara H., et al (2012). OsGA20ox1, a candidate gene for a major QTL controlling seedling vigor in rice. Theor. Appl. Genet. 125 647-657. doi: 10.1007/s00122-012-1857-z
• Chen L. K., Gao W. W., Chen S. P., Wang L. P., Zou J. Y., Liu Y. Z., et al (2016). High-resolution QTL mapping for grain appearance traits and co-localization of chalkiness-associated differentially expressed candidate genes in rice. Rice 9:48. doi: 10.1186/s12284-016-0121-6
• R Core Team (2015). R: A Language and Environment for Statistical Computing. Vienna: R Foundation for Statistical Computing. doi: 10.1186/s12284-016-0121-6
• Fujino K., Iwata N. (2011). Selection for low-temperature germinability on the short arm of chromosome 3 in rice cultivars adapted to Hokkaido, Japan. Theor. Appl. Genet. 123 1089-1097. doi: 10.1007/s00122-011-1650-4
• Fujino K., Sekiguchi H., Matsuda Y., Sugimoto K., Ono K., Yano M. (2008). Molecular identification of a major quantitative trait locus, qLTG3-1, controlling low-temperature germinability in rice. Proc. Natl. Acad. Sci. U.S.A. 105 12623-12628. doi: 10.1073/pnas.0805303105

Terms in the title (7)： RNA ,  イネ ,  戻し交雑 ,  近交系 ,  初期 ,  成長速度 ,  転写産物