Kojima Yasuhiro

コジマヤスヒロ | Kojima Yasuhiro

Affiliation and department：
Job title： Laboratory Head
Research theme for competitive and other funds (3)：

2022 - 2025 大腸がん細胞との共局在により悪性度と免疫寛容を獲得するがん微小環境の解明
2020 - 2023 エピゲノムダイナミクスに基づくがん多様性の新たな理解
2020 - 2022 Revealing molecular mechanisms of cancer cell heterogeneity induced by inter-cellular interaction

Papers (12)：

Chikara Mizukoshi, Yasuhiro Kojima, Satoshi Nomura, Shuto Hayashi, Ko Abe, Teppei Shimamura. DeepKINET: a deep generative model for estimating single-cell RNA splicing and degradation rates. Genome Biology. 2024. 25. 1
Masahiro Hashimoto, Yasuhiro Kojima, Takeharu Sakamoto, Yuki Ozato, Yusuke Nakano, Tadashi Abe, Kiyotaka Hosoda, Hideyuki Saito, Satoshi Higuchi, Yuichi Hisamatsu, et al. Spatial and single-cell colocalisation analysis reveals MDK-mediated immunosuppressive environment with regulatory T cells in colorectal carcinogenesis. EBioMedicine. 2024. 105102-105102
Yasuhiro Kojima, Shinji Mii, Shuto Hayashi, Haruka Hirose, Masato Ishikawa, Masashi Akiyama, Atsushi Enomoto, Teppei Shimamura. Single-cell colocalization analysis using a deep generative model. Cell Systems. 2024. 15. 2. 180-192.e7
Masato Ishikawa, Seiichi Sugino, Yoshie Masuda, Yusuke Tarumoto, Yusuke Seto, Nobuko Taniyama, Fumi Wagai, Yuhei Yamauchi, Yasuhiro Kojima, Hisanori Kiryu, et al. RENGE infers gene regulatory networks using time-series single-cell RNA-seq data with CRISPR perturbations. Communications biology. 2023. 6. 1. 1290-1290
Ryuichi Nakahara, Sho Aki, Maki Sugaya, Haruka Hirose, Miki Kato, Keisuke Maeda, Daichi M Sakamoto, Yasuhiro Kojima, Miyuki Nishida, Ritsuko Ando, et al. Hypoxia activates SREBP2 through Golgi disassembly in bone marrow-derived monocytes for enhanced tumor growth. The EMBO Journal. 2023

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Education (3)：

Work history (6)：

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