Rchr
J-GLOBAL ID：202001021459982977
Update date: Feb. 20, 2024
Inoue Fumitaka
イノウエ フミタカ | Inoue Fumitaka
Affiliation and department：
Job title：
特定准教授
Homepage URL (2)：
https://ashbi.kyoto-u.ac.jp/lab-sites/inoue_lab/
,
https://ashbi.kyoto-u.ac.jp/lab-sites/inoue_lab/en/
Research field (3)：
Developmental biology
, Molecular biology
, Genomics
Research keywords (4)：
ゲノム進化
, 神経分化
, Massively Parallel Reporter Assay
, エンハンサー
Research theme for competitive and other funds (5)：
- 2022 - 2027 大規模並列レポーターアッセイによるヒト特性と非コードゲノム進化の解明
- 2021 - 2024 大規模並列レポーターアッセイ法による転移因子進化メカニズムの解明
- 2021 - 2024 Evaluating the role of cis-regulatory tandem DNA repeats in human disease and evolution
- 2022 - 2023 ヒト特性を担う遺伝子制御領域の大規模機能アノテーション
- 2013 - 2013 Massively parallel functional analysis of gene regulatory elements
Papers (32)：
-
Davide Capauto, Yifan Wang, Feinan Wu, Scott Norton, Jessica Mariani, Fumitaka Inoue, Gregory E Crawford, Nadav Ahituv, Alexej Abyzov, Flora M Vaccarino. Characterization of enhancer activity in early human neurodevelopment using Massively Parallel Reporter Assay (MPRA) and forebrain organoids. Scientific reports. 2024. 14. 1. 3936-3936
-
Yuanqing Feng, Ning Xie, Fumitaka Inoue, Shaohua Fan, Joshua Saskin, Chao Zhang, Fang Zhang, Matthew E B Hansen, Thomas Nyambo, Sununguko Wata Mpoloka, et al. Integrative functional genomic analyses identify genetic variants influencing skin pigmentation in Africans. Nature genetics. 2024. 56. 2. 258-272
-
Jiayi Liu, Tal Ashuach, Fumitaka Inoue, Nadav Ahituv, Nir Yosef, Anat Kreimer. Optimizing sequence design strategies for perturbation MPRAs: a computational evaluation framework. Nucleic acids research. 2024
-
Xun Chen, Zicong Zhang, Yizhi Yan, Clement Goubert, Guillaume Bourque, Fumitaka Inoue. Cryptic endogenous retrovirus subfamilies in the primate lineage. 2023
-
Jiayi Liu, Tal Ashuach, Fumitaka Inoue, Nadav Ahituv, Nir Yosef, Anat Kreimer. Best practices for perturbation MPRA-a computational evaluation framework of sequence design strategies. 2023
ｍore...
MISC (3)：
-
井上詞貴. ヒト加速領域(HAR)の機能と進化を機械学習により検証する. 実験医学. 2023. 41. 13
-
Fumitaka Inoue. Decoding neural induction using massively parallel reporter assays. Jikken Igaku. 2020. 38. 4
-
Fumitaka Inoue. Genomic and epigenomic mapping of leptin-responsive neurons in the hypothalamus. Jikken Igaku. 2019. 37. 14
Lectures and oral presentations (10)：
-
Massively parallel dissection of regulatory code underlying neural differentiation
(The 56th Annual Meeting of the Japanese Society of Developmental Biologists 2023)
-
Massively parallel functional dissection of transposable element enhancer variants
(The 45th Molecular Biology Society of Japan 2022)
-
Decoding non-coding genome using massively parallel reporter assays
(NGS EXPO 2022 2022)
-
大規模並列レポーターアッセイが紐解く細胞分化、進化、疾患
(第10回 都医学研シンポジウム ゲノム機能解析の進展とその医科学への応用 2020)
-
Functional Dissection of Neural Enhancers Using Massively Parallel Reporter Assays
(The 7th Annual Molecular Psychiatry Meeting 2019)
ｍore...
Education (3)：
- 2005 - 2008 Saitama University Graduate School of Science and Engineering
- 2003 - 2005 Saitama University Graduate School of Science and Engineering
- 1999 - 2003 Saitama University Faculty of Science
Work history (5)：
- 2020/07 - 現在 Kyoto University Institute for the Advanced Study of Human Biology (ASHBi) Associate Professor
- 2018/08 - 2020/06 University of California, San Francisco Department of Bioengineering and Therapeutic Sciences Assistant Researcher
- 2017/08 - 2018/07 University of California, San Francisco Department of Bioengineering and Therapeutic Sciences Associate Specialist
- 2012/08 - 2017/07 University of California, San Francisco Department of Bioengineering and Therapeutic Sciences Postdoctoral Fellow
- 2008/04 - 2012/07 RIKEN Center for Developmental Biology Researcher
Awards (1)：
- 2018/02 - ENCODE consortium meeting Best Poster Award
Association Membership(s) (3)：
American society of human genetics
, 日本発生生物学会
, 日本分子生物学会
