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J-GLOBAL ID：202002220002960645   Reference number：20A0872213

Potential energy landscape and thermodynamic transitions of coarse-grained protein models revealed by the multicanonical generalized hybrid Monte Carlo method

マルチカノニカル一般化ハイブリッドモンテカルロ法により明らかにされた粗視化蛋白質モデルのポテンシャルエネルギー地形と熱力学的転移

Author (2)： Mukuta Natsuki (Division of Mathematical and Physical Sciences, Graduate School of Natural Science and Technology, Kanazawa University) ,  Miura Shinichi (Faculty of Mathematics and Physics, Kanazawa University)
Material： Biophysics and Physicobiology (Web)  (Biophys Physicobiology (Web))
Volume： 17  Page： 14-24(J-STAGE)  Publication year： 2020 
JST Material Number： U0030A  ISSN： 2189-4779  Document type： Article
Article type： 原著論文  Country of issue： Japan (JPN)  Language： ENGLISH (EN)

Thesaurus term： conformational transition ,...
Semi thesaurus term： *Protein Folding ,...

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Author keywords (4)： protein folding ,  multicanonical ensemble ,  generalized hybrid Monte Carlo ,  Go-like model

JST classification (4)： Molecular structure  (EB03020Y) ,  Proteins and peptides in general  (EB03010N) ,  Molecular and genetic information processing  (JE15040B) ,  Biophysics in general  (EA02020O)

Reference (48)：

• [1] Anfinsen, C. B. Principles that Govern the Folding of Protein Chains. Science 181, 223-230 (1973).
• [2] Go, N. Theoretical Studies of Protein Folding. Annu. Rev. Biophys. Bioeng. 12, 183-210 (1983).
• [3] Onuchic, J. N., Luthey-Schulten, Z. & Wolynes, P. G. THEORY OF PROTEIN FOLDING: The Energy Landscape Perspective. Annu. Rev. Phys. Chem. 48, 545-600 (1997).
• [4] Pande, V. S., Grosberg, A. Y. & Tanaka, T. Heteropolymer freezing and design: Towards physical models of protein folding. Rev. Mod. Phys. 72, 259-314 (2000).
• [5] Shakhnovich, E. Protein Folding Thermodynamics and Dynamics: Where Physics, Chemistry, and Biology Meet. Chem. Rev. 106, 1559-1588 (2006).

Terms in the title (8)： 一般化 ,  モンテカルロ法 ,  粗視化 ,  蛋白質 ,  モデル ,  ポテンシャル ,  エネルギー地形 ,  熱力学