Rsrc
J-GLOBAL ID:202010000212587258   Research Resource code:NBDC02094 Update date:Jun. 24, 2019

CUBE-DB

CUBE-DB
Owning Organization:
  • Evolution of Protein Structure and Function Group, Biomolecular Modelling and Design Division, Bioinformatics Institute
Resource classification: Database
Tag (subject)  (1): Genome/Gene
Tag (data type)  (1): Sequence
Species (1): Vertebrata (NCBI Taxonomy ID: 7742)
Overview:
Detection of functional divergence in human protein families. Cube-DB is a database of pre-evaluated conservation and specialization scores for residues in paralogous proteins belonging to multi-member families of human proteins. Protein family classification follows (largely) the classification suggested by HUGO Gene Nomenclature Committee. Sets of orthologous protein sequences were generated by mutual-best-hit strategy using full vertebrate genomes available in Ensembl. The scores, described on documentation page, are assigned to each individual residue in a protein, and presented in the form of a table (html or downloadable xls formats) and mapped, when appropriate, onto the related structure (Jmol, Pymol, Chimera).
Source: FAIRsharing
Record maintainer: See the corresponding part in the FAIRsharing record
Record license: Creative Commons Attribution and Share-alike (CC-BY-SA) International 4.0 license

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