J-GLOBAL ID:202010002084330586   Research Resource code:NBDC02125 Update date:Jul. 09, 2020


Owning Organization:
  • Plant Molecular Biology Institute (IBMP)
Resource classification: Database
Tag (subject)  (2): Cell/Organelle ,  RNA
Tag (data type)  (1): Sequence
Species (12): Arabidopsis thaliana (NCBI Taxonomy ID: 3702) ,  Brachypodium distachyon (NCBI Taxonomy ID: 15368) ,  Chlamydomonas reinhardtii (NCBI Taxonomy ID: 3055) ,  Cyanophora paradoxa (NCBI Taxonomy ID: 2762) ,  Ectocarpus siliculosus (NCBI Taxonomy ID: 2880) ,  Medicago truncatula (NCBI Taxonomy ID: 3880) ,  Oryza sativa (NCBI Taxonomy ID: 4530) ,  Ostreococcus tauri (NCBI Taxonomy ID: 70448) ,  Phaeodactylum tricornutum (NCBI Taxonomy ID: 2850) ,  Physcomitrella patens (NCBI Taxonomy ID: 3218) ,  Populus trichocarpa (NCBI Taxonomy ID: 3694) ,  Solanum tuberosum (NCBI Taxonomy ID: 4113)
The PlantRNA database compiles tRNA gene sequences retrieved from fully annotated plant nuclear, plastidial and mitochondrial genomes. For each tRNA gene, the linear secondary structure is given as well as biological information. This includes 5'- and 3'- flanking sequences, A and B box sequences, region of transcription initiation and poly(T) transcription termination stretches, tRNA intron sequences, aminoacyl-tRNA synthetases and enzymes responsible for tRNA maturation and modification. Data on mitochondrial import of nuclear-encoded tRNAs as well as the bibliome for the respective tRNAs and tRNA binding proteins are also included.
Source: FAIRsharing
Record maintainer: See the corresponding part in the FAIRsharing record
Record license: Creative Commons Attribution and Share-alike (CC-BY-SA) International 4.0 license

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