J-GLOBAL ID:202010002904133403   Research Resource code:NBDC02491 Update date:Jan. 21, 2020

piRTarBase: piRNA targeting sites

piRTarBase: piRNA targeting sites
Owning Organization:
  • Department of Electrical Engineering, National Cheng Kung University
Resource classification: Data,Database
Tag (subject)  (2): Genome/Gene ,  RNA
Tag (data type)  (3): Sequence ,  Expression ,  Interaction/Pathway
Species (2): Caenorhabditis elegans (NCBI Taxonomy ID: 6239) ,  Caenorhabditis briggsae (NCBI Taxonomy ID: 6238)
piRTarBase is a database about PIWI-interacting RNAs (piRNAs) which are a class of small noncoding RNAs that guard animal genomes against mutation by silencing transposons. It provides both predicted and experimentally identified piRNA targeting sites in Caenorhabditis elegans and Caenorhabditis briggsae. User can search a list of piRNA targeting sites or mRNA targets by a gene or piRNA. The piRTarBase integrates published mRNA and small RNA sequencing data.
Source: NBDC
Record maintainer: Integbio Database Catalog
Record license: Creative Commons CC0 license

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