Rsrc
J-GLOBAL ID:202010004324216665
Research Resource code:NBDC02000
Update date:Jul. 09, 2020
short Open Reading Frame database: sorfs.org
short Open Reading Frame database: sorfs.org
Owning Organization:
-
BIOBIX (Lab of bioinformatics and computational genomics)
Resource classification:
Data,Database
Tag (subject) (2):
Genome/Gene
, RNA
Tag (data type) (2):
Sequence
, Repository
Overview:
sORFs.org is a database for sORFs identified using ribosome profiling. Starting from ribosome profiling, sORFs.org identifies sORFs, incorporates state-of-the-art tools and metrics and stores results in a public database. Two query interfaces are provided, a default one enabling quick lookup of sORFs and a BioMart interface providing advanced query and export possibilities. At present, sORFs.org harbors 263 354 sORFs that demonstrate ribosome occupancy, originating from three different cell lines: HCT116 (human), E14_mESC (mouse) and S2 (fruit fly).
Source:
FAIRsharing
Record maintainer:
See the corresponding part in the FAIRsharing record
Record license:
Creative Commons Attribution and Share-alike (CC-BY-SA) International 4.0 license
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