Rsrc
J-GLOBAL ID:202010005406886541   Research Resource code:NBDC01924 Update date:Jul. 09, 2020

ModBase database of comparative protein structure models: ModBase

ModBase database of comparative protein structure models: ModBase
Owning Organization:
  • Laboratory of Andrej Sali, University of California at San Francisco (UCSF)
Resource classification: Database
Tag (subject)  (1): Protein
Tag (data type)  (2): Sequence ,  3D structure
Species (1): All (NCBI Taxonomy ID: 1)
Overview:
ModBase (http://salilab.org/modbase) is a database of annotated comparative protein structure models. The models are calculated by ModPipe, an automated modeling pipeline that relies primarily on Modeller for fold assignment, sequence-structure alignment, model building, and model assessment (http://salilab.org/modeller/). ModBase currently contains almost 30 million reliable models for domains in 4.7 million unique protein sequences. ModBase allows users to compute or update comparative models on demand, through an interface to the ModWeb modeling server (http://salilab.org/modweb). ModBase models are also available through the Protein Model Portal (http://www.proteinmodelportal.org/).
Source: FAIRsharing
Record maintainer: See the corresponding part in the FAIRsharing record
Record license: Creative Commons Attribution and Share-alike (CC-BY-SA) International 4.0 license

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