Rsrc
J-GLOBAL ID:202010006988687820   Research Resource code:NBDC02504 Update date:Mar. 10, 2020

Factorbook

Factorbook
Owning Organization:
  • University of Massachusetts Medical School
Resource classification: Database
Tag (subject)  (4): Genome/Gene ,  Epigenetics ,  DNA ,  Protein
Tag (data type)  (3): Sequence ,  Expression ,  Interaction/Pathway
Species (2): Homo sapiens (NCBI Taxonomy ID: 9606) ,  Mus musculus (NCBI Taxonomy ID: 10090)
Overview:
Factorbook is a transcription factor (TF)-centric wiki-style repository of all ENCODE ChIP-seq datasets on TF-binding regions, as well as the rich analysis results of these data. That organizes all the information associated with each TF, including the ChIP-seq peaks, discovered motifs, TF-TF interactions, and the chromatin features (histone modification patterns, DNase I cleavage, and nucleosome positioning) around the ChIP-seq peaks. The main page displays an alphabetized matrix of TFs and cell lines. Clicking the TF name opens the individual page on the TF. Factorbook is planned to update whenever more ENCODE data are available.
Source: NBDC
Record maintainer: Integbio Database Catalog
Record license: Creative Commons CC0 license

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