Rsrc
J-GLOBAL ID:202010007277922857   Research Resource code:NBDC01795 Update date:May. 19, 2019

ArchDB

ArchDB
Owning Organization:
  • Laboratoire de Microbiologie et Genetique Moleculaires (LMGM)
  • SBI
  • bioinsilico.org
Resource classification: Database
Tag (subject)  (1): Protein
Tag (data type)  (3): Classification ,  Sequence ,  3D structure
Species (1): All (NCBI Taxonomy ID: 1)
Overview:
ArchDB is a compilation of structural classifications of loops extracted from known protein structures. The structural classification is based on the geometry and conformation of the loop. The geometry is defined by four internal variables and the type of regular flanking secondary structures, resulting in 10 different loop types. Loops in ArchDB have been classified using an improved version (Espadaler et al.) of the original ArchType program published in 1997 by Oliva et al.
Source: FAIRsharing
Record maintainer: See the corresponding part in the FAIRsharing record
Record license: Creative Commons Attribution and Share-alike (CC-BY-SA) International 4.0 license

Return to Previous Page