Research Resource code：NBDC02058
Update date：Mar. 28, 2019
Tag (subject) (2)：
Tag (data type) (1)：
Drosophila melanogaster (NCBI Taxonomy ID: 7227)
, Homo sapiens (NCBI Taxonomy ID: 9606)
, Mus musculus (NCBI Taxonomy ID: 10090)
This resource provides information primarily on the upstream non-coding sequence data of genes in 3 genomes which gives insight into the transcription factors binding sites (TFBSs). For each transcript, the region scanned extends from 10,000bp upstream of the transcript start to 50bp downstream of the coding sequence start. Therefore, the database contains putative binding sites in the gene promoter and in the initial introns and non-coding exons.
Information displayed for each putative binding site includes the transcription factor name, its position (absolute on the chromosome, or relative to the gene), the score of the prediction, and the region of the gene the site belongs to. If the selected gene has homologs in any of the other two organisms, the program optionally displays the putative TFBSs in the homologs.
See the corresponding part in the FAIRsharing record
Creative Commons Attribution and Share-alike (CC-BY-SA) International 4.0 license
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