Rsrc
J-GLOBAL ID:202010011402359342   Research Resource code:NBDC02487 Update date:Nov. 19, 2019

OpenProt

OpenProt
Owning Organization:
  • Université de Sherbrooke
Resource classification: Database
Tag (subject)  (2): Protein ,  Genome/Gene
Tag (data type)  (2): Sequence ,  Expression
Species (10): Homo sapiens (NCBI Taxonomy ID: 9606) ,  Mus musculus (NCBI Taxonomy ID: 10090) ,  Rattus norvegicus (NCBI Taxonomy ID: 10116) ,  Pan troglodytes (NCBI Taxonomy ID: 9598) ,  Danio rerio (NCBI Taxonomy ID: 7955) ,  Drosophila melanogaster (NCBI Taxonomy ID: 7227) ,  Caenorhabditis elegans (NCBI Taxonomy ID: 6239) ,  Bos taurus (NCBI Taxonomy ID: 9913) ,  Saccharomyces cerevisiae S288c (NCBI Taxonomy ID: 559292) ,  Ovis aries (NCBI Taxonomy ID: 9940)
Overview:
OpenProt is a database that enforces a polycistronic model of eukaryotic genome annotations. It annotates known proteins (RefProts), novel predicted isoforms (Isoforms) and novel predicted proteins from alternative ORFs (AltProts). It also provides supporting evidence for each protein, such as mass-spectrometry and ribosome profiling detection, protein homology and predictions of funtional domains. Ensembl, NCBI RefSeq and combined Ensembl+RefSeq annotations are available for all species.
Source: NBDC
Record maintainer: Integbio Database Catalog
Record license: Creative Commons CC0 license

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