J-GLOBAL ID:202010014690841799   Research Resource code:NBDC02101 Update date:Mar. 28, 2019

SitEx database of eukaryotic protein functional sites: SitEx

SitEx database of eukaryotic protein functional sites: SitEx
Owning Organization:
  • The Federal Research Center Institute of Cytology and Genetics Lab
  • Novosibirsk State University
Resource classification: Database
Tag (subject)  (2): Genome/Gene ,  Protein
Tag (data type)  (3): Sequence ,  Classification ,  3D structure
Species (18): Anopheles gambiae (NCBI Taxonomy ID: 7165) ,  Ascaris suum (NCBI Taxonomy ID: 6253) ,  Bos taurus (NCBI Taxonomy ID: 9913) ,  Caenorhabditis elegans (NCBI Taxonomy ID: 6239) ,  Canis familiaris (NCBI Taxonomy ID: 9615) ,  Cavia porcellus (NCBI Taxonomy ID: 10141) ,  Danio rerio (NCBI Taxonomy ID: 7955) ,  Echis multisquamatus (NCBI Taxonomy ID: 93050) ,  Equus caballus (NCBI Taxonomy ID: 9796) ,  Eukaryota (NCBI Taxonomy ID: 2759) ,  Gallus gallus (NCBI Taxonomy ID: 9031) ,  Homo sapiens (NCBI Taxonomy ID: 9606) ,  Mus musculus (NCBI Taxonomy ID: 10090) ,  Oryctolagus cuniculus (NCBI Taxonomy ID: 9986) ,  Protobothrops flavoviridis (NCBI Taxonomy ID: 88087) ,  Rattus norvegicus (NCBI Taxonomy ID: 10116) ,  Sus scrofa (NCBI Taxonomy ID: 9823) ,  Xenopus tropicalis (NCBI Taxonomy ID: 8364)
SitEx is a database containing information on eukaryotic protein functional sites. It stores the amino acid sequence positions in the functional site, in relation to the exon structure of encoding gene This can be used to detect the exons involved in shuffling in protein evolution, or to design protein-engineering experiments.
Source: FAIRsharing
Record maintainer: See the corresponding part in the FAIRsharing record
Record license: Creative Commons Attribution and Share-alike (CC-BY-SA) International 4.0 license

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