Rsrc
J-GLOBAL ID:202010014869029981   Research Resource code:NBDC02469 Update date:Oct. 09, 2019

EncoMPASS: Encyclopedia of Membrane Proteins Analyzed by Structure and Symmetry

EncoMPASS: Encyclopedia of Membrane Proteins Analyzed by Structure and Symmetry
Owning Organization:
  • National Institute of Neurological Disorders & Stroke
Resource classification: Database
Tag (subject)  (1): Protein
Tag (data type)  (3): Sequence ,  3D structure ,  Interaction/Pathway
Species (1): All (NCBI Taxonomy ID: 1)
Overview:
EncoMPASS is a database for relating integral membrane proteins from the points of view of their sequence, structure, and quaternary and internal symmetries. Analysis was done for all membrane-spanning PDB entries and separately for all membrane-spanning chains found therein in terms of the relationships between integral membrane proteins using structural and sequence similarity, and the symmetry of integral membrane proteins structures. It contains;
1) General information about the complete biological unit of each membrane protein structure.
2) A list of chains contained in the biological unit and their relationships to other structures in the database.
3) Raw output from two symmetry detection programs: CE-Symm and SymD.
4) Consensus results from processing with SymD and CE-Symm with default and customized parameters.
Source: NBDC
Record maintainer: Integbio Database Catalog
Record license: Creative Commons CC0 license

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