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J-GLOBAL ID：202102275204637302   Reference number：21A0347896

Mapping 3D genome organization relative to nuclear compartments using TSA-Seq as a cytological ruler

TSA-Seqを用いた核コンパートメントに関係のある3Dゲノム構成の細胞学的ルーラとしてのマッピング【JST・京大機械翻訳】

Author (13)： Chen Yu (Department of Cell and Developmental Biology, University of Illinois at Urbana-Champaign, Urbana, IL) ,  Zhang Yang (Department of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, IL) ,  Zhang Yang (Computational Biology Department, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA) ,  Wang Yuchuan (Computational Biology Department, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA) ,  Zhang Liguo (Department of Cell and Developmental Biology, University of Illinois at Urbana-Champaign, Urbana, IL) ,  Brinkman Eva K. (Division of Gene Regulation, Netherlands Cancer Institute, Amsterdam, Netherlands) ,  Adam Stephen A. (Department of Cell and Molecular Biology, Northwestern University Feinberg School of Medicine, Chicago, IL) ,  Goldman Robert (Department of Cell and Molecular Biology, Northwestern University Feinberg School of Medicine, Chicago, IL) ,  van Steensel Bas (Division of Gene Regulation, Netherlands Cancer Institute, Amsterdam, Netherlands) ,  Ma Jian (Computational Biology Department, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA) ,  Belmont Andrew S. (Department of Cell and Developmental Biology, University of Illinois at Urbana-Champaign, Urbana, IL) ,  Belmont Andrew S. (Center for Biophysics and Quantitative Biology, University of Illinois at Urbana-Champaign, Urbana, IL) ,  Belmont Andrew S. (Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL)
Material： Journal of Cell Biology  (JCB)
Volume： 217  Issue： 11  Page： 4025-4048  Publication year： 2018 
JST Material Number： C0575A  ISSN： 0021-9525  CODEN： JCLBA3  Document type： Article
Article type： 原著論文  Country of issue： United States (USA)  Language： ENGLISH (EN)

Abstract/Point： While nuclear compartmentaliza...

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Thesaurus term： nuclear structure ,  mapping ,  convolution ,  gene ,  chromosome ,  positioning ,  *genome ,  speckle ,  *three dimension ,  gene expression ,  housekeeping gene ,  K562 cell ,  *Cell Biology
Semi thesaurus term： ドメイン構造 ,  スーパーエンハンサー , 【Automatic Indexing@JST】

JST classification (4)： Cell components in general  (EF03010Z) ,  Molecular genetics in general  (EC02010J) ,  Cell physiology in general  (EF02010S) ,  Cell division and proliferation  (EF02020D)

Reference (56)：

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• Bickmore. The spatial organization of the human genome. Annu. Rev. Genomics Hum. Genet. 2013, 14, 67. doi:10.1146/annurev-genom-091212-153515
• Bobrow. Catalyzed reporter deposition, a novel method of signal amplification. Application to immunoassays. J. Immunol. Methods. 1989, 125, 279. doi:10.1016/0022-1759(89)90104-X
• Bobrow. Catalyzed reporter deposition, a novel method of signal amplification. II. Application to membrane immunoassays. J. Immunol. Methods. 1991, 137, 103. doi:10.1016/0022-1759(91)90399-Z

Terms in the title (8)： TSA ,  核 ,  コンパートメント ,  3D ,  ゲノム構成 ,  細胞学 ,  ルーラ ,  マッピング