Rsrc
J-GLOBAL ID：202110005171295408
Research Resource code：NBDC02225
Update date：Feb. 20, 2023
SwissRegulon
SwissRegulon
Owning Organization：
-
SIB (Swiss Institute of Bioinformatics)
Resource classification：
Data,Database
Tag (subject) (2)：
Genome/Gene
, Epigenetics
Tag (data type) (3)：
Sequence
, Expression
, Interaction/Pathway
Species (20)：
Bacillus subtilis (NCBI Taxonomy ID: 1423)
, Brucella suis (NCBI Taxonomy ID: 29461)
, Burkholderia pseudomallei K96243 (NCBI Taxonomy ID: 272560)
, Burkholderia thailandensis E264 (NCBI Taxonomy ID: 271848)
, Chlamydophila caviae (NCBI Taxonomy ID: 83557)
, Corynebacterium glutamicum R (NCBI Taxonomy ID: 340322)
, Ehrlichia canis (NCBI Taxonomy ID: 944)
, Escherichia coli (NCBI Taxonomy ID: 562)
, Homo sapiens (NCBI Taxonomy ID: 9606)
, Mus musculus (NCBI Taxonomy ID: 10090)
, Mycobacterium tuberculosis (NCBI Taxonomy ID: 1773)
, Neisseria meningitidis (NCBI Taxonomy ID: 487)
, Prochlorococcus marinus (NCBI Taxonomy ID: 1219)
, Pseudomonas syringae (NCBI Taxonomy ID: 317)
, Ralstonia eutropha (NCBI Taxonomy ID: 106590)
, Rickettsia typhi 'wilmington' (NCBI Taxonomy ID: 257363)
, Saccharomyces cerevisiae (NCBI Taxonomy ID: 4932)
, Staphylococcus aureus (NCBI Taxonomy ID: 1280)
, Streptococcus pneumoniae (NCBI Taxonomy ID: 1313)
, Vibrio cholerae (NCBI Taxonomy ID: 666)
Overview：
The Swissregulon Database contains genome-wide annotations of regulatory sites. The predictions are based on Bayesian probabilistic analysis of a combination of input information including i) Experimentally determined binding sites reported in the literature, ii) Known sequence-specificities of transcription factors, iii) ChIP-chip and ChIP-seq data, iiii) Alignments of orthologous non-coding regions.
Source：
FAIRsharing
Record maintainer：
See the corresponding part in the FAIRsharing record
Record license：
Creative Commons Attribution and Share-alike (CC-BY-SA) International 4.0 license
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