J-GLOBAL ID:202110005171295408   Research Resource code:NBDC02225 Update date:Feb. 20, 2023


Owning Organization:
  • SIB (Swiss Institute of Bioinformatics)
Resource classification: Data,Database
Tag (subject)  (2): Genome/Gene ,  Epigenetics
Tag (data type)  (3): Sequence ,  Expression ,  Interaction/Pathway
Species (20): Bacillus subtilis (NCBI Taxonomy ID: 1423) ,  Brucella suis (NCBI Taxonomy ID: 29461) ,  Burkholderia pseudomallei K96243 (NCBI Taxonomy ID: 272560) ,  Burkholderia thailandensis E264 (NCBI Taxonomy ID: 271848) ,  Chlamydophila caviae (NCBI Taxonomy ID: 83557) ,  Corynebacterium glutamicum R (NCBI Taxonomy ID: 340322) ,  Ehrlichia canis (NCBI Taxonomy ID: 944) ,  Escherichia coli (NCBI Taxonomy ID: 562) ,  Homo sapiens (NCBI Taxonomy ID: 9606) ,  Mus musculus (NCBI Taxonomy ID: 10090) ,  Mycobacterium tuberculosis (NCBI Taxonomy ID: 1773) ,  Neisseria meningitidis (NCBI Taxonomy ID: 487) ,  Prochlorococcus marinus (NCBI Taxonomy ID: 1219) ,  Pseudomonas syringae (NCBI Taxonomy ID: 317) ,  Ralstonia eutropha (NCBI Taxonomy ID: 106590) ,  Rickettsia typhi 'wilmington' (NCBI Taxonomy ID: 257363) ,  Saccharomyces cerevisiae (NCBI Taxonomy ID: 4932) ,  Staphylococcus aureus (NCBI Taxonomy ID: 1280) ,  Streptococcus pneumoniae (NCBI Taxonomy ID: 1313) ,  Vibrio cholerae (NCBI Taxonomy ID: 666)
The Swissregulon Database contains genome-wide annotations of regulatory sites. The predictions are based on Bayesian probabilistic analysis of a combination of input information including i) Experimentally determined binding sites reported in the literature, ii) Known sequence-specificities of transcription factors, iii) ChIP-chip and ChIP-seq data, iiii) Alignments of orthologous non-coding regions.
Source: FAIRsharing
Record maintainer: See the corresponding part in the FAIRsharing record
Record license: Creative Commons Attribution and Share-alike (CC-BY-SA) International 4.0 license

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