J-GLOBAL ID:202110011429789443   Research Resource code:NBDC02581 Update date:Aug. 24, 2021

oRNAment: o RNA motifs enrichment in complete transcriptomes

oRNAment: o RNA motifs enrichment in complete transcriptomes
Owning Organization:
  • Lécuyer Lab, Institut de Recherches Cliniques de Montéral
Resource classification: Data,Database
Tag (subject)  (3): Genome/Gene ,  RNA ,  Protein
Tag (data type)  (3): Sequence ,  Classification ,  Interaction/Pathway
Species (5): Homo sapiens (NCBI Taxonomy ID: 9606) ,  Caenorhabditis elegans (NCBI Taxonomy ID: 6239) ,  Danio rerio (NCBI Taxonomy ID: 7955) ,  Drosophila melanogaster (NCBI Taxonomy ID: 7227) ,  Mus musculus (NCBI Taxonomy ID: 10090)
oRNAment is a database of putative RBP (RNA-binding-protein) binding site instances in coding and non-coding RNA in five species. For each RBP, this database mainly provides an organism it is derived from, the coding gene, the name and position on the genome of its motif, and similarity score to the canonical motif. Users can search from an organism, RBP name, attributes of gene and mRNA, and a region of a motif. Search results and all data are downloadable.
Source: NBDC
Record maintainer: Integbio Database Catalog
Record license: Creative Commons CC0 license

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