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J-GLOBAL ID：202210004894132117 Research Resource code：NBDC02613 Update date：Apr. 13, 2022

VISDB: Viral Integration Site DataBase

Owning Organization：

UTHealth (University of Texas Health Science Center at Houston)

Resource classification： Data,Database

Tag (subject) (4)： Genome/Gene , Genetic variation , RNA , Health/Disease

Tag (data type) (2)： Sequence , Interaction/Pathway

Species (9)： Hepatitis B virus (NCBI Taxonomy ID: 10407) , Human papillomavirus (NCBI Taxonomy ID: 10566) , Human gammaherpesvirus 4 (NCBI Taxonomy ID: 10376) , Adeno-associated virus - 2 (NCBI Taxonomy ID: 10804) , Human immunodeficiency virus (NCBI Taxonomy ID: 12721) , Human T-cell leukemia virus type I (NCBI Taxonomy ID: 11908) , Merkel cell polyomavirus (NCBI Taxonomy ID: 493803) , Murine leukemia virus (NCBI Taxonomy ID: 11786) , Xenotropic MuLV-related virus (NCBI Taxonomy ID: 438045)

Overview：

VISDB is a knowledgebase of site-related information about viruses integrated into human genome. It covers 9 main viruses, including 5 DNA oncoviruses (HBV, HPV, EBV, MCV, AAV2) and 4 RNA retroviruses (HIV, MLV, HTLV, XMRV). Each entry is carefully curated from publications and includes information for fusion event, validated (yes or no), detection method, sample type (tumor or nontumor), disease, quality evaluation, virus sequence, host sequence, miRNAs for regulate target gene, upstream and downstream sequences, etc.

Source： NBDC

Record maintainer： Integbio Database Catalog

Record license： Creative Commons CC0 license

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