Rchr
J-GLOBAL ID：202301006015188959   Update date: Nov. 07, 2024

SAKAI Yusuke

サカイ ユウスケ | SAKAI Yusuke
Affiliation and department：
RIKEN

About RIKEN


Research keywords  (7)： DNA nanotechnology ,  atomic force microscopy ,  RNA modification ,  transfer RNA ,  decoding machinery ,  molecular machine ,  DNA origami
Research theme for competitive and other funds  (10)：
  • 2023 - 2025 Hierarchical Self-Assembly of 2D DNA Platform for Multiscale Nanoarray
  • 2023 - 2025 Universal and Modular Molecular Motor for DNA nanodevices
  • 2021 - 2024 dna-origami-db for automation of DNA origami research
  • 2022 - 2023 Multiplex nucleic acid detection method enabled by DNA origami and artificial metabolism
  • 2021 - 2023 Sensitive and Specific Long RNA Detecting Nanodevice for Future Lab-Test Diagnosis
Show all
Papers (12)：
  • Gerrit D. Wilkens, Piotr Stępień, Yusuke Sakai, Md. Sirajul Islam, Jonathan G. Heddle. A DNA Origami Bubble Blower for Liposome Production. ACS Omega. 2024
  • Yusuke Sakai, Gerrit D. Wilkens, Karol Wolski, Szczepan Zapotoczny, Jonathan G. Heddle. Topogami: Topologically Linked DNA Origami. ACS Nanoscience Au. 2022. 2. 1. 57-63
  • Shiu, S.C.-C., Sakai, Y., Tanner, J.A., Heddle, J.G. Fret-mediated observation of protein-triggered conformational changes in dna nanostructures. Methods in Molecular Biology. 2021. 2208. 69-80
  • Sakai, Y., Kimura, S., Suzuki, T. Dual pathways of tRNA hydroxylation ensure efficient translation by expanding decoding capability. Nature Communications. 2019. 10. 1. 2858
  • Sakai, Y., Islam, M.S., Adamiak, M., Shiu, S.C.-C., Tanner, J.A., Heddle, J.G. DNA aptamers for the functionalisation of DNA origami nanostructures. Genes. 2018. 9. 12. 571-571
ｍore...
MISC (2)：
  • 酒井 雄介. 研究最前線. 分子サイバネティクスニュースレター. 2022. 5. 88-88
  • 酒井 雄介. 長年の探索から埋れていたtRNA修飾酵素の同定, ゲノム微生物学の研究トレンド2. ゲノム微生物学会ニュースレター. 2019. 20. 8-13
Patents (1)：
  • Topogami and method for making interlocked single stranded dna rings
Lectures and oral presentations  (16)：
  • Directional Graph Modelling for Solution Design and Experiment Automation
    (DNA 30 2024)
  • Universal molecular motor module for DNA nanodevices
    (oxDNA users and developers workshop 2024 2024)
  • Dimeric DNA origami nanocapsules for controllable cargo accessibility
    (21st Annual Conference on Foundations of Nanoscience (FNANO2024) 2024)
  • ‘dna-origami-db’ towords automation of;DNA origami research
    (The 16th Annual Meeting of the Japanese Society for Cell Synthesis Research 2023)
  • The On-Chip Nucleic Acids Fractionation aimed at parallelised preparation of DNA nanosystems
    (2023)
ｍore...
Works (2)：
  • protocol-designer-to-py
    Yusuke Sakai 2023 - 現在
  • Cadnano Tools
    Yusuke Sakai 2022 - 現在
Education (3)：
  • 2013 - 2016 The University of Tokyo The Graduate School of Engineering (PhD course) Department of Chemistry and Biotechnology
  • 2011 - 2013 The University of Tokyo The Graduate School of Engineering (Master course) Department of Chemistry and Biotechnology
  • 2007 - 2011 The University of Tokyo The Faculty of Engineering Department of Chemistry and Biotechnology
Work history (5)：
  • 2020/09 - 現在 RIKEN Center for Biosystems Dynamics Research Research Scientist
  • 2016/10 - 2020/08 Jagiellonian University in Krakow Malopolska Centre of Biotechnology Scientific Assistant
  • 2017/09 - 2019/08 Jagiellonian University in Krakow Malopolska Centre of Biotechnology POLONEZ3 Fellow
  • 2016/04 - 2016/09 The University of Tokyo The Graduate School of Engineering
  • 2013/04 - 2016/03 The University of Tokyo The Graduate School of Engineering
Committee career (1)：
  • 2024/04 - 現在 生物物理学会人工細胞モデル&分子ロボティクスサブグループ ヤングオーガナイザー
Awards (4)：
  • 2021/11 - 5th Annual Meeting of Molecular Robotics Japan Young researcher award (Poster award) Enzymatic catenation of long DNA for "Topogami" (translate)
  • 2019/07 - FEBS Letter Daily Poster Award DNA origami nanocapsules for controllable cargo accessibility.
  • 2017/02 - Horizon 2020 Marie Sklodowska-Curie Actions Seal of Excellence
  • 2015/12 - Oxford University Press NAR Breakthrough Article Biogenesis and growth phase-dependent alteration of 5-methoxycarbonylmethoxyuridine in tRNA anticodons
Association Membership(s) (4)：
Chemical Society of Japan ,  Chem-Bio Informatics Society ,  日本生物物理学会 ,  The Society of Instrument and Control Engineers
※ Researcher’s information displayed in J-GLOBAL is based on the information registered in researchmap. For details, see here.

Return to Previous Page

TOP

BOTTOM