Fukasawa Yoshinori

フカサワヨシノリ | Fukasawa Yoshinori

Affiliation and department：
Job title： Associate Professor

Research field (2)： Systems genomics , Biological, health, and medical informatics

Research keywords (4)： Protein structure analysis , Omics analysis , Genome science , Bioinformatics

Research theme for competitive and other funds (4)：

Papers (20)：

Daichi Okawa, Takumi Yuge, Mayu Kawabuchi, Shiho Jitsukawa, Masahiko Otani, Risa Fujita, Michio Kuruma, Kenji Miura, Satoko Yoshida, Kotaro Nishiyama, et al. Functional conservation of the non-canonical strigolactone biosynthetic pathway in root parasitic plants. Plant & cell physiology. 2025
Géraldine C. Genard, Luca Tirinato, Francesca Pagliari, Jessica Da Silva, Alessandro Giammona, Fatema Alquraish, Maria Parra Reyes, Marie Bordas, Maria Grazia Marafioti, Simone Di Franco, et al. Lipid droplets and small extracellular vesicles: More than two independent entities. Journal of Extracellular Biology. 2024. 3. 9
Yoshinori Fukasawa, Patrick Driguez, Salim Bougouffa, Karen Carty, Alexander Putra, Ming-Sin Cheung, Luca Ermini. Plasticity of repetitive sequences demonstrated by the complete mitochondrial genome of Eucalyptus camaldulensis. Frontiers in plant science. 2024. 15. 1339594-1339594
Yoshinori Fukasawa, Kenichiro Imai, Paul Horton. Prediction of mitochondrial targeting signals and their cleavage sites. Methods in Enzymology. 2024. 161-192
Lama AlAbdi, Hanan E Shamseldin, Ebtissal Khouj, Rana Helaby, Bayan Aljamal, Mashael Alqahtani, Aisha Almulhim, Halima Hamid, Mais O Hashem, Firdous Abdulwahab, et al. Beyond the exome: utility of long-read whole genome sequencing in exome-negative autosomal recessive diseases. Genome medicine. 2023. 15. 1. 114-114

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MISC (2)：

Lectures and oral presentations (5)：

Navigating the Obstacles of Long-Read Variant Calling in Complex Genomes
(The Plant & Animal Genome Conference (PAG) 32 2025)
高精度ロングリード時代の変異検出
(第47回日本分子生物学会年会 2024)
Solutions and new challenges of bioinformatics in long-accurate read era.
(GIW/ISCB-Asia 2022 2022)
Reference-free data quality control using LongQC
(Nanopore Community Meeting 2020 2020)
Accurate prediction of mitochondrial presequence and their cleavage site with MitoFates identifies hundreds of novel human mitochondrial protein candidates
(ISMB 2014 2014)

Education (3)：

2009 - 2014 The University of Tokyo Graduate School of Frontier Sciences Department of Computational Biology
2004 - 2009 Tohoku University Faculty of Agriculture Department of Applied Bio-Sciences
2007 - 2008 University of California, Davis College of Biological Sciences Plant biology

Professional career (1)：

Work history (6)：

2023/04 - 現在 Utsunomiya University Center for Bioscience Reseach & Education Associate Professor
2018/07 - 2023/03 King Abdullah University of Science and Technology Core Labs Team lead
2017/05 - 2018/07 King Abdullah University of Science and Technology Core Labs Staff scientist
2015/04 - 2017/03 National Institute of Advanced Industrial Science and Technology Artificial Intelligence Research Center AIST Postdoctoral Researcher
2014/10 - 2015/03 Japan Society for the Promotion of Science Research Fellowships for Young Scientists (PD)

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Committee career (2)：

2023/09 - 2024/09 日本植物学会第88回大会実行委員会
2012 - 2013 Asian Young Researchers Conference on Computational and Omics Biology (AYRCOB) Organizing committee

Awards (6)：

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Association Membership(s) (3)：

植物インフォマティクス研究会 , 日本分子生物学会 , The Botanical Society of Japan

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