Rchr
J-GLOBAL ID：201301049355449068   Update date: Feb. 20, 2024

Kasukawa Takeya

Kasukawa Takeya
Affiliation and department：
RIKEN

About RIKEN


Other affiliations (2)：
Research field  (2)： Database science ,  Systems genomics
Research keywords  (6)： Microarray ,  RNA-Seq ,  Transcriptome ,  Genome ,  Database ,  Bioinformatics
Research theme for competitive and other funds  (3)：
  • 2022 - 2025 A multi-omics study on multiple system atrophy patients with family history
  • 2021 - 2024 転写ユニティー機構を構築する多因子間相互作用の時空間的かつ定量的解明
  • 2021 - 2023 Development of data analysis platform technology for data-driven genomic breeding
Papers (95)：
  • Imad Abugessaisa, Ri-Ichiroh Manabe, Tsugumi Kawashima, Michihira Tagami, Chitose Takahashi, Yasushi Okazaki, Stefania Bandinelli, Takeya Kasukawa, Luigi Ferrucci. OVCH1 Antisense RNA 1 is differentially expressed between non-frail and frail old adults. GeroScience. 2024. 46. 2. 2063-2081
  • Takuya Kuroda, Satoshi Yasuda, Satoko Matsuyama, Takumi Miura, Rumi Sawada, Akifumi Matsuyama, Yumiko Yamamoto, Masaki Suimye Morioka, Hideya Kawaji, Takeya Kasukawa, et al. ROR2 expression predicts human induced pluripotent stem cell differentiation into neural stem/progenitor cells and GABAergic neurons. Scientific reports. 2024. 14. 1. 690-690
  • Jonathan Moody, Tsukasa Kouno, Miki Kojima, Ikuko Koya, Julio Leon, Akari Suzuki, Akira Hasegawa, Taishin Akiyama, Nobuko Akiyama, Masayuki Amagai, et al. A single-cell atlas of transcribedcis-regulatory elements in the human genome. 2023
  • Takumi Miura, Tsukasa Kouno, Megumi Takano, Takuya Kuroda, Yumiko Yamamoto, Shinji Kusakawa, Masaki Suimye Morioka, Tohru Sugawara, Takamasa Hirai, Satoshi Yasuda, et al. Single-Cell RNA-Seq Reveals LRRC75A-Expressing Cell Population Involved in VEGF Secretion of Multipotent Mesenchymal Stromal/Stem Cells Under Ischemia. Stem Cells Translational Medicine. 2023. 12. 6. 379-390
  • Imad Abugessaisa, Akira Hasegawa, Shintaro Katayama, Juha Kere, Takeya Kasukawa. Computational approach to evaluate scRNA-seq data quality and gene body coverage with SkewC. STAR protocols. 2023. 4. 1. 102038-102038
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MISC (22)：
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Patents (1)：
Books (7)：
  • 時間薬理学による最新の治療戦略
    医薬ジャーナル社 2013 ISBN:4753226042
  • 体内時計の科学と産業応用 (バイオテクノロジーシリーズ)
    シーエムシー出版 2011 ISBN:4781303404
  • 改訂第2版 バイオデータベースとウェブツールの手とり足とり活用法 - 遺伝子の配列・機能解析、タンパク質解析、プロテオミクス、文献検索、検索エンジン...etc.真に役立つサイトを使い倒す!
    羊土社 2007 ISBN:4758108110
  • RとBioconductorを用いたバイオインフォマティクス
    シュプリンガー・ジャパン株式会社 2007 ISBN:4431734643
  • バイオインフォマティクス ゲノム配列から機能解析へ 第2版
    メディカル・サイエンス・インターナショナル 2005 ISBN:4895924262
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Lectures and oral presentations  (1)：
  • Updating a data warehouse with low traffic cost
    (IPSJ SIG Notes 1997)
Professional career (1)：
  • Ph.D (informatics) (Osaka University)
Work history (8)：
  • 2022/04 - 現在 Yokohama City University Graduate School of Medical Life Science Visiting Professor
  • 2019/10 - 現在 RIKEN RIKEN Center for Integrative Medical Sciences Team Leader
  • 2018/10 - 現在 Osaka University Institute for Protein Research Visiting Professor
  • 2018/04 - 2019/09 RIKEN RIKEN Center for Integrative Medical Sciences Unit Leader
  • 2013/04 - 2018/03 RIKEN Center for Life Science Technology Unit Leader
Show all
Association Membership(s) (4)：
THE INSTITUTE OF ELECTRONICS, INFORMATION AND COMMUNICATION ENGINEERS ,  INFORMATION PROCESSING SOCIETY OF JAPAN ,  JAPANESE SOCIETY FOR BIOINFORMATICS ,  THE MOLECULAR BIOLOGY SOCIETY OF JAPAN
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