Shangru Jia, Tatsuhiko Tsunoda, Alok Sharma. multi-GAT: Integrative Analysis of scRNA-seq and scATAC-seq Data Using Graph Attention Networks for Cell Annotation. 2025
Alok Sharma, Artem Lysenko, Shangru Jia, Keith A. Boroevich, Tatsuhiko Tsunoda. Advances in AI and machine learning for predictive medicine. Journal of Human Genetics. 2024
Daisuke Watanabe, Nobuhiko Okamoto, Yuichi Kobayashi, Hisato Suzuki, Mitsuhiro Kato, Shinji Saitoh, Yonehiro Kanemura, Toshiki Takenouchi, Mamiko Yamada, Daisuke Nakato, et al. Biallelic structural variants in three patients with ERCC8-related Cockayne syndrome and a potential pitfall of copy number variation analysis. Scientific reports. 2024. 14. 1. 19741-19741
Yuji Nakamura, Issei S Shimada, Reza Maroofian, Micol Falabella, Maha S Zaki, Masanori Fujimoto, Emi Sato, Hiroshi Takase, Shiho Aoki, Akihiko Miyauchi, et al. Biallelic null variants in PNPLA8 cause microcephaly by reducing the number of basal radial glia. Brain : a journal of neurology. 2024
Alok Sharma, Yosvany López, Shangru Jia, Artem Lysenko, Keith A Boroevich, Tatsuhiko Tsunoda. Enhanced analysis of tabular data through Multi-representation DeepInsight. Scientific reports. 2024. 14. 1. 12851-12851
Genome-Wide Association Studies
Springer 2019 ISBN:9789811381768
Encyclopedia of bioinformatics and computational biology
Elsevier 2019 ISBN:9780128114148
Genome Function - Expression Profiles and Transcriptomes (Genome Science in Post-Sequencing) (Genome Science in Post-Sequencing 2)
2000 ISBN:4521610218
1992 - 1995 The University of Tokyo The Graduate School of Engineering Doctor Course Department of Engineering
1989 - 1991 The University of Tokyo Graduate School of Science Master Course Department of Physics
1987 - 1989 The University of Tokyo Faculty of Science Department of Physics
1985 - 1987 The University of Tokyo Natural Sciences I
Professional career (2):
Ph.D. (Medicine) (Osaka University)
Ph.D. (Eng.) (The University of Tokyo)
Work history (11):
2019/04 - 現在 The University of Tokyo Graduate School of Frontier Sciences Department of Computational Biology and Medical Sciences Professor (concurrent)
2019/04 - 現在 The University of Tokyo Graduate School of Science Department of Biological Sciences Professor
2018/04 - 現在 RIKEN RIKEN Center for Integrative Medical Sciences Team leader (concurrent)
2015/07 - 2022/03 Tokyo Medical and Dental University Medical Research Institute Professor
2013/04 - 2018/03 RIKEN RIKEN Center for Integrative Medical Sciences Group director
2011/04 - 2013/03 RIKEN RIKEN Center for Genomic Medicine Group director
2008/04 - 2011/03 RIKEN RIKEN Center for Genomic Medicine Laboratory head
2000/04 - 2008/03 RIKEN RIKEN SNP Research Center Laboratory head
1998/04 - 2000/03 The University of Tokyo The Institute of Medical Science Human Genome Center Assistant professor
1997/04 - 1998/03 The University of Tokyo The Institute of Medical Science Human Genome Center Research associate
1995/04 - 1997/03 Kyoto University Graduate School of Engineering Assistant professor
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Awards (5):
2016 - Dream Challenges Certificate of Best Performance - Disease Module Identification DREAM Challenge Sub-Challenge 2,DREAM Challenge
2009 - The Japan Society of Human Genetics Encouraging Award
2004 - The 13th Takeda Science Foundation Symposium on Bioscience on Genome Analysis and Medicine Poster Award
1994 - Information Processing Society of Japan 48th National Conference Encouragement Award
1993 - International Joint Conference on Neural Networks Student Award
Association Membership(s) (3):
The Molecular Biology Society of Japan
, The Japan Society of Human Genetics
, The Japanese Cancer Association