Rchr
J-GLOBAL ID:200901002926960580   Update date: Nov. 18, 2024

TSUNODA Tatsuhiko

ツノダ タツヒコ | TSUNODA Tatsuhiko
Affiliation and department:
Job title: Professor
Other affiliations (2):
  • The University of Tokyo  Graduate School of Frontier Sciences   Professor
  • RIKEN  RIKEN Center for Integrative Medical Sciences   Team Leader
Homepage URL  (2): https://mesm.bs.s.u-tokyo.ac.jphttps://mesm.bs.s.u-tokyo.ac.jp/Research_Eng.html
Research field  (1): Systems genomics
Research keywords  (4): Omics analysis ,  Quantum computing ,  Deep learning ,  Tumor microenvironment
Research theme for competitive and other funds  (22):
  • 2020 - 2025 Integrated Multi-Omics Analysis Methodology with Image Transformation and Deep Learning for Pathophysiology and Drug Response Mechanisms
  • 2021 - 2025 Multi-omics of ovarian cancer organoids for development of novel therapeutics against drug-resistant ovarian cancers
  • 2020 - 2025 Development of personalized soft tissue sarcoma therapies through the integrated genomic analysis
  • 2018 - 2022 Elucidation of molecular mechanism that defines therapeutic effects of atrial fibrillation and risk diagnosis
  • 2017 - 2022 Development and application of analysis methodology for next generation human omics
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Papers (414):
  • Shangru Jia, Tatsuhiko Tsunoda, Alok Sharma. multi-GAT: Integrative Analysis of scRNA-seq and scATAC-seq Data Using Graph Attention Networks for Cell Annotation. 2025
  • Alok Sharma, Artem Lysenko, Shangru Jia, Keith A. Boroevich, Tatsuhiko Tsunoda. Advances in AI and machine learning for predictive medicine. Journal of Human Genetics. 2024
  • Daisuke Watanabe, Nobuhiko Okamoto, Yuichi Kobayashi, Hisato Suzuki, Mitsuhiro Kato, Shinji Saitoh, Yonehiro Kanemura, Toshiki Takenouchi, Mamiko Yamada, Daisuke Nakato, et al. Biallelic structural variants in three patients with ERCC8-related Cockayne syndrome and a potential pitfall of copy number variation analysis. Scientific reports. 2024. 14. 1. 19741-19741
  • Yuji Nakamura, Issei S Shimada, Reza Maroofian, Micol Falabella, Maha S Zaki, Masanori Fujimoto, Emi Sato, Hiroshi Takase, Shiho Aoki, Akihiko Miyauchi, et al. Biallelic null variants in PNPLA8 cause microcephaly by reducing the number of basal radial glia. Brain : a journal of neurology. 2024
  • Alok Sharma, Yosvany López, Shangru Jia, Artem Lysenko, Keith A Boroevich, Tatsuhiko Tsunoda. Enhanced analysis of tabular data through Multi-representation DeepInsight. Scientific reports. 2024. 14. 1. 12851-12851
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MISC (129):
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Books (5):
  • Genome-Wide Association Studies
    Springer 2019 ISBN:9789811381768
  • Encyclopedia of bioinformatics and computational biology
    Elsevier 2019 ISBN:9780128114148
  • Genome Function - Expression Profiles and Transcriptomes (Genome Science in Post-Sequencing) (Genome Science in Post-Sequencing 2)
    2000 ISBN:4521610218
  • SNP遺伝子多型の戦略 : ゲノムの多様性と21世紀のオーダーメイド医療
    中山書店 2000 ISBN:4521610110
  • Natural Language Processing
    1996 ISBN:4000103555
Lectures and oral presentations  (85):
  • Quantum Computing in Omics Medicine
    (RIKEN Quantum & iTHMES Biology Group Seminar 2024)
  • 国際ハップマップ計画によるゲノムワイド関連研究の加速
    (バイオバンクジャパン20周年シンポジウム 2024)
  • 数理科学が拓くオミクス医科学
    (東京大学大学院新領域創成科学研究科社会人向け教育プログラムゲノムスクール2023年度秋季コース 2023)
  • 深層学習が拓くオミクス医科学
    (第61回日本癌治療学会学術集会特別WS「ポストゲノム時代の人工知能(AI)研究」 2023)
  • 新たなオミクス医科学を拓く深層学習と数理科学
    (第44回日本炎症・再生医学会・シンポジウム2「オミックス最前線」 2023)
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Education (4):
  • 1992 - 1995 The University of Tokyo The Graduate School of Engineering Doctor Course Department of Engineering
  • 1989 - 1991 The University of Tokyo Graduate School of Science Master Course Department of Physics
  • 1987 - 1989 The University of Tokyo Faculty of Science Department of Physics
  • 1985 - 1987 The University of Tokyo Natural Sciences I
Professional career (2):
  • Ph.D. (Medicine) (Osaka University)
  • Ph.D. (Eng.) (The University of Tokyo)
Work history (11):
  • 2019/04 - 現在 The University of Tokyo Graduate School of Frontier Sciences Department of Computational Biology and Medical Sciences Professor (concurrent)
  • 2019/04 - 現在 The University of Tokyo Graduate School of Science Department of Biological Sciences Professor
  • 2018/04 - 現在 RIKEN RIKEN Center for Integrative Medical Sciences Team leader (concurrent)
  • 2015/07 - 2022/03 Tokyo Medical and Dental University Medical Research Institute Professor
  • 2013/04 - 2018/03 RIKEN RIKEN Center for Integrative Medical Sciences Group director
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Awards (5):
  • 2016 - Dream Challenges Certificate of Best Performance - Disease Module Identification DREAM Challenge Sub-Challenge 2,DREAM Challenge
  • 2009 - The Japan Society of Human Genetics Encouraging Award
  • 2004 - The 13th Takeda Science Foundation Symposium on Bioscience on Genome Analysis and Medicine Poster Award
  • 1994 - Information Processing Society of Japan 48th National Conference Encouragement Award
  • 1993 - International Joint Conference on Neural Networks Student Award
Association Membership(s) (3):
The Molecular Biology Society of Japan ,  The Japan Society of Human Genetics ,  The Japanese Cancer Association
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