Oda Mayumi

オダマユミ | Oda Mayumi

Affiliation and department：
Job title： Assistant professor

Research field (4)： Gastroenterology , Veterinary medicine , Genomics , Systems genomics

Research keywords (14)： ATAC-seq , Chromatin accessibility , DNA methylation , Epigenomics , Cellular differentiation , Epigenetics , Development and regeneration , Tissue-specific gene expression regulation , Genomics , Bioinformatics , Stem cell biology , Transcription factors , early development , Developmental reprogramming

Research theme for competitive and other funds (11)：

2023 - 2027 成体細胞の柔軟な機能維持に関わる包括的メカニズムの解明
2018 - 2022 Mechanism for cardiomyocyte-specific nuclear architecture and disease development by dynamic DNA demethylation system.
2017 - 2020 組織幹細胞の維持・若返りを可能にする新規分子メカニズム
2015 - 2017 The establishment of cell maturation induction method by the gene body-centered epigenomic monitoring.
2014 - 2017 Comparison of suppression effect of myopia progression focusing on mTOR signaling, ultraviolet light, and antioxidant

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Papers (39)：

Toshiki Ebisudani, Junko Hamamoto, Kazuhiro Togasaki, Akifumi Mitsuishi, Kai Sugihara, Taro Shinozaki, Takahiro Fukushima, Kenta Kawasaki, Takashi Seino, Mayumi Oda, et al. Genotype-phenotype mapping of a patient-derived lung cancer organoid biobank identifies NKX2-1-defined Wnt dependency in lung adenocarcinoma. Cell reports. 2023. 42. 3. 112212-112212
Keiko Ishikawa, Shinya Sugimoto, Mayumi Oda, Masayuki Fujii, Sirirat Takahashi, Yuki Ohta, Ai Takano, Kazuhiro Ishimaru, Mami Matano, Kosuke Yoshida, et al. Identification of Quiescent LGR5⁺ Stem Cells in the Human Colon. Gastroenterology. 2022. 163. 5. 1391-1406.e24
Koichi Murakami, Daisuke Kurotaki, Wataru Kawase, Shunsuke Soma, Yumi Fukuchi, Hiroyoshi Kunimoto, Ryusuke Yoshimi, Shuhei Koide, Motohiko Oshima, Takako Hishiki, et al. OGT Regulates Hematopoietic Stem Cell Maintenance via PINK1-Dependent Mitophagy. Cell reports. 2021. 34. 1. 108579-108579
Yuhki Nakatake, Shigeru B H Ko, Alexei A Sharov, Shunichi Wakabayashi, Miyako Murakami, Miki Sakota, Nana Chikazawa, Chiaki Ookura, Saeko Sato, Noriko Ito, et al. Generation and Profiling of 2,135 Human ESC Lines for the Systematic Analyses of Cell States Perturbed by Inducing Single Transcription Factors. Cell reports. 2020. 31. 7. 107655-107655
Nanae Tsuchida, Junya Kojima, Atsushi Fukuda, Mayumi Oda, Tomoyuki Kawasaki, Hiroe Ito, Naoaki Kuji, Keiichi Isaka, Hirotaka Nishi, Akihiro Umezawa, et al. Transcriptomic features of trophoblast lineage cells derived from human induced pluripotent stem cells treated with BMP 4. Placenta. 2020. 89. 20-32

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MISC (50)：

Mayumi Oda, Yoshiko Hatano, Toshiro Sato. Intestinal epithelial organoids: regeneration and maintenance of the intestinal epithelium. Current opinion in genetics & development. 2022. 76. 101977-101977
小田真由美. ゲノムの非コード重要領域を探る : ATAC-seqが拡げるクロマチンアクセシビリティ解析の可能性. 遺伝子医学 = Gene & medicine. 2022. 12. 3. 122-127
小田真由美. The effect of cell type-specificity genetic elements and epigenetic status on cellular maturation. 日本分子生物学会年会プログラム・要旨集(Web). 2021. 44th
Oda Mayumi. Epigenetics Now and Then: Toward a New Resolution. JSBi Bioinformatics Review. 2021. 2. 1. 7-14
小田真由美, 小田真由美. 心筋細胞成熟のGene body領域エピジェネティクスとスプライシング制御. 日本分子生物学会年会プログラム・要旨集(Web). 2019. 42nd

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Patents (2)：

Lectures and oral presentations (1)：

「クローン動物由来の胎盤栄養膜幹細胞」
(日本畜産学会第104回大会シンポジウム 2005)

Professional career (1)：

D. V. M., Ph. D. (The University of Tokyo)

Work history (5)：

2023/04 - 現在 Keio University Department of Integrated Medicine and Biochemistry Assistant professor
2021/04 - 2023/03 Keio University School of Medicine The Sakaguchi Laboratory - Department of Organoid Medicine Project lecturer
2018/07 - 2020/03 Keio University School of Medicine Project Lecturer
2012/07 - 2018/06 Keio University School of Medicine The Sakaguchi Laboratory - Department of Systems Medicine Instructor
2010/04 - 2012/06 Keio University School of Medicine Center for Integrated Medical Research Project Instructor

Awards (2)：

2004/08 - Society for Study of Reproduction Trainee Research Poster Competition The first place
2004/08 - Society for Study of Reproduction Lalor Foundation Travel Fellow

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